LOCUS       NM_001106788            2397 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus TraB domain containing (Trabd), mRNA.
ACCESSION   NM_001106788 XM_001054533 XM_217013
VERSION     NM_001106788.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474027.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_217013.4, XM_001054533.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q34"
     gene            1..2397
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /note="TraB domain containing"
                     /db_xref="GeneID:300142"
                     /db_xref="RGD:1310875"
     exon            1..72
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            73..137
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     CDS             108..1238
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /codon_start=1
                     /product="traB domain-containing protein"
                     /protein_id="NP_001100258.1"
                     /db_xref="GeneID:300142"
                     /db_xref="RGD:1310875"
                     /translation="MEGEEKPAQEADVEPMVTSGASEAVPRVLSGDPQNISDVDAFNL
                     LLEMKLKRRRERPNLPCTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVV
                     VVELCQYRVSMLKMDERTLLREAKEVSLEKLQQAVKQNGLMSGLMQMLLLKVSAHITE
                     QLGMAPGGEFREAFKEASKVPFCKFHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFL
                     SDPISKDDVERCKQKDLLEQMMAEMIGEFPDLHRTIVSERDVYLTYMLRQAARRLELP
                     RASDAEPRKCVPSVVVGVVGMGHVPGIEKNWSTDLNIQEIMTVPPPSITGRVSRAAVK
                     AAFFGLLGYSLYWMGRRTVNLVLSLPAAQFCLQRVSEARPGR"
     exon            138..216
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            217..383
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            384..524
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            525..635
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            636..775
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            776..948
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1060
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
     exon            1061..2397
                     /gene="Trabd"
                     /gene_synonym="RGD1310875"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccccggcc caccccgtca gcccggcgac gcgcgcatgg aggccggctg aggaacgccg
       61 ccgcctcgct cggcatccta caccaatcag gaagctgctg tccagccatg gagggagagg
      121 agaagccagc tcaagaggct gacgtggaac ccatggtaac atcaggggcc tcagaagcag
      181 tgccaagggt gctttctgga gaccctcaga acatctctga tgtagatgcc ttcaacttgc
      241 tcctggagat gaaactgaaa cgacggcgtg agcgtcccaa ccttccatgt actgtgaccc
      301 agctagtggc cgaggatggc agcagggtgt atgtggtggg cactgctcac ttcagtgatg
      361 acagcaagag ggatgtagtg aagactatcc gggaggtgca gcctgatgtg gtggttgtgg
      421 aactctgtca gtaccgtgtt tccatgctga agatggatga gagaactctg ctgcgggagg
      481 ccaaggaggt cagcctggag aagctgcaac aggctgtcaa gcagaatggg ctcatgtctg
      541 gactcatgca gatgttgcta ctgaaggtgt ccgctcacat cactgagcag ctaggcatgg
      601 cccctggtgg cgagttcagg gaggccttca aggaggccag caaggtacca ttctgcaaat
      661 tccacttggg tgaccgacca atcccagtca cctttaagag ggccattgct gcactctcct
      721 tctggcagaa agtcaagctg gcctggggcc tatgcttcct gtcagaccca atcagcaaag
      781 acgacgtgga gcgctgcaag cagaaggacc tgctggagca gatgatggca gagatgattg
      841 gggagttccc tgacctgcat cgaaccattg tctcagagcg cgacgtctac ctgacctaca
      901 tgctgcggca ggccgcacgg cgcctcgagc ttccccgcgc ctctgatgct gagcccagga
      961 agtgtgtccc atctgtggtc gtgggcgtcg ttggcatggg ccatgtgcct ggcattgaaa
     1021 agaactggag tactgacctc aacatccagg agatcatgac agttcccccg ccatccatca
     1081 caggcagagt gtcccgggca gctgtgaagg ctgctttctt tggtctgctg ggctacagcc
     1141 tgtactggat gggccgtcga accgtgaacc tggtcctatc actgcctgct gcgcagttct
     1201 gcctccagag ggtgagcgag gcccggccag gtcggtagga ggaccgtgca cggaaggacc
     1261 gcacccggag ctctactcct ctacatggtg tctggtgctc ccgaggagct ggcaccgcct
     1321 gtctggggat gtccctgggt acagatttgt ccaagccacc ccctatgggg gcctaggcca
     1381 ggatttcctg ccttccccat gcccagccca cccaaataaa gaatatttaa ctgtctgagc
     1441 ccaggcttcc cagcagcccc acacacacac tgtagggccg gccacctatg ggcatcaggg
     1501 ccatccacag tgtcaggacc cagcggccta gttccaaaag gaccagaagc tgagggggag
     1561 gcactgaggc acccaccctc ggcccaggtg ggtctggcag gttgtggctc tacctacctc
     1621 actgtgcctt gtggtctggc tggcaggagc aggtggccct gagtgcatct cactgtgggt
     1681 ttggggagct gggtgcccat gcacctcctc cctgggtgtg tagggccttt gcctgacctg
     1741 gacatgcatg tggcattgcc ggccgcatct ctgcctgcag agagtctgtg ctttggtttt
     1801 gtggggtttt gttttctgtt tttgttgttt ttgtttttaa tgtcaaaaag ttttttactc
     1861 aggtaatttt gatgtcaaag agaaaacaaa ctgaagcaaa tatcaggaaa tacaagcctt
     1921 aaatccagtg aggtcaaaga agtcatcttt ttatttgtgt ctgtgtgccc tgcgtgggcc
     1981 gtgtatgtga gtcagtttag gggtccaggc cagcccctgc tagacgccac tacagctcag
     2041 agtggtgtgc ggctgcctca gatatgagct gcaaggctgc ccttggtgct ggtagggcgc
     2101 tggcctgatt gctgtgagct aggtgggatg atgcccaaac tgccctgggg acagtaggca
     2161 cccactacct aggaccatgg ctggtttgtg tgcatccagc cattcatgtg tgcaggctgt
     2221 ggctcctggc acactgcaca gctggaagat cacattgact gtccttgtgt cggctgccga
     2281 atcaggtgaa gcactgagct gggggtacag ggggtacagg gcttgttggg ctgcgtactt
     2341 ctgtctcaca ctcgtgcatt cattccctag aaagaaataa attttaattt tggaagc
//
