LOCUS       XM_017593013            2087 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Tp53rk binding protein (Tprkb),
            transcript variant X7, mRNA.
ACCESSION   XM_017593013
VERSION     XM_017593013.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017593013.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017593013.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2087
                     /gene="Tprkb"
                     /gene_synonym="Cgi-121; RGD1309786"
                     /note="Tp53rk binding protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 22 ESTs, 4 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 230 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297411"
                     /db_xref="RGD:1309786"
     CDS             38..565
                     /gene="Tprkb"
                     /gene_synonym="Cgi-121; RGD1309786"
                     /codon_start=1
                     /product="EKC/KEOPS complex subunit Tprkb isoform X1"
                     /protein_id="XP_017448502.1"
                     /db_xref="GeneID:297411"
                     /db_xref="RGD:1309786"
                     /translation="MQLTQQLDLFPECKVTLLLFKDVKNAGDLRKKAMEGSIDGSLIN
                     ANVIVDPFQILVAANKAVHLHKLGKMKTRTLSTEIIFNLSPNNNISEALKKFGISESN
                     TSVLIVYVEDGDKQVHQEHLVSQVEGQQVPLESLPEITRLSEVRKIYKLSSQEERIGT
                     LLDGIICRMSTKDVL"
ORIGIN      
        1 agacggacag gagactgagg acctccttgt ctatgaaatg cagttaacac agcagctgga
       61 cttgtttccc gagtgcaagg tgacccttct gttatttaaa gatgtaaaaa atgcaggaga
      121 cttgagaaaa aaggccatgg aaggatctat agatggctca ttgataaatg ccaatgtgat
      181 tgtcgatcca tttcaaatac ttgtggcagc aaacaaagcc gttcatctcc acaaactggg
      241 aaaaatgaag acaagaactc tgtctactga aattatcttc aacctctccc caaataataa
      301 tatttcagag gctttgaaga agtttggcat ctcagaaagt aacacttcag ttctgattgt
      361 ttatgttgaa gatggagaca aacaagtgca tcaggaacac ctagtatctc aagtggaagg
      421 ccagcaggtg cccttggaaa gtcttcctga aataacaagg ctctcagaag tcaggaagat
      481 atataaactg tcatcacaag aagagaggat tgggacatta ttggatggta tcatttgtag
      541 aatgtcaaca aaggatgttt tataagttgt ttaaaatatc aacagaaaat catagaggta
      601 attactagct tttctttccc acttctaaaa ttaacattct catcacagga aaagggaaga
      661 aggtactact accagtccgt ttgttttttt acttcttaaa gataacctct gtcactggtt
      721 ttatcattgt tatttagtcc tctacttata tttcaagacc tttcattttt atacaattgg
      781 aataaaaagt gcaagcacct agagaaggct tcggtgctca aggctcagcc tcagtaatcc
      841 ttcatcactt tgtcactcac cttatacttc tggcttttcc acattgccct tctaagctct
      901 gggtcctgag agttttacgc ctaagaattt cttttactct aagccaggtg tggtgacttt
      961 ttacagtcca ctactcagga ggctgaggca ggagaaagct acaagttcaa gatcagccta
     1021 aagtactatg tcagttccct tctcaataaa tacacagcag ttcatttaac tctcttagcc
     1081 acttattaag tggatatgtc tttgtgcctc tttatacacg aggcaactga aagattgtag
     1141 gaatactaac cgattagcct agggtcatgt aactagtata aaaccatgtt tgacggttcc
     1201 ttttccccct cactttatct tgtattttga ttgtatccat cacaataggt ttggtcaaag
     1261 gtcagcaaaa cattgctcct caaaggccat ctggtccctg ctcaattact caataccacc
     1321 tttgcagtct gaaagcagat acagaggaca ggtggatagt gagtggcctc tgtccgtaag
     1381 cattgagttg agctggcggt gggcagccct ggagttgagg ctgtggactc cagagttggt
     1441 tatagtgaca gtcaggcctt aaagctcact ggctcagtac agcagaagga aacatttcgt
     1501 tatctttaag gtcatacaga ccatagggaa aaccggcagc tgtgttttag gagccttctg
     1561 ctgggcctct caccctgggc ttttaggtta ccgtgcagct gggcagaagc tctggggagg
     1621 cagtgtacct tgaaagcatc cacacgggag agaccatatt gctcacctct tttctttcat
     1681 acaagtttta aaatggtgac tccatgttct tcccccaagc ccagtcagtt ctgcgccttc
     1741 agtcctctct agagctccta gtctgaaaag cctggaaccc tctcagagtg cagttctagg
     1801 gttgttctct aggtaccctg tggtggtttg aatacacctg gcctagggag tggcactatt
     1861 aggaggtgtg gccttgttgg agtaggtatg gccttgacag agttggagta gtatgtcact
     1921 gtgggcatgg gcttgggagc cagtcttttc ttggtggcct tcagatgaag atgtagagct
     1981 ctcagctcct gcaccatgcc tgcctagaca ctgtcatgct cctgccttga tgataatgga
     2041 ctgaaactct gaacctgtaa gccagcccca attaaatgtc cttataa
//
