LOCUS       XM_006236746            1179 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Tp53rk binding protein (Tprkb),
            transcript variant X3, mRNA.
ACCESSION   XM_006236746
VERSION     XM_006236746.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236746.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006236746.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1179
                     /gene="Tprkb"
                     /gene_synonym="Cgi-121; RGD1309786"
                     /note="Tp53rk binding protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 17 ESTs, 9 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 230 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297411"
                     /db_xref="RGD:1309786"
     CDS             148..675
                     /gene="Tprkb"
                     /gene_synonym="Cgi-121; RGD1309786"
                     /codon_start=1
                     /product="EKC/KEOPS complex subunit Tprkb isoform X1"
                     /protein_id="XP_006236808.1"
                     /db_xref="GeneID:297411"
                     /db_xref="RGD:1309786"
                     /translation="MQLTQQLDLFPECKVTLLLFKDVKNAGDLRKKAMEGSIDGSLIN
                     ANVIVDPFQILVAANKAVHLHKLGKMKTRTLSTEIIFNLSPNNNISEALKKFGISESN
                     TSVLIVYVEDGDKQVHQEHLVSQVEGQQVPLESLPEITRLSEVRKIYKLSSQEERIGT
                     LLDGIICRMSTKDVL"
ORIGIN      
        1 aggagtccgc ccaccggaaa caggctgcct tggagtccgt ccacctgatc aaacattaag
       61 ctcttccgga agtagagagc ttcgtttcca aggggacgat cttctgagac ggacaggaga
      121 ctgaggagag acctccttgt ctatgaaatg cagttaacac agcagctgga cttgtttccc
      181 gagtgcaagg tgacccttct gttatttaaa gatgtaaaaa atgcaggaga cttgagaaaa
      241 aaggccatgg aaggatctat agatggctca ttgataaatg ccaatgtgat tgtcgatcca
      301 tttcaaatac ttgtggcagc aaacaaagcc gttcatctcc acaaactggg aaaaatgaag
      361 acaagaactc tgtctactga aattatcttc aacctctccc caaataataa tatttcagag
      421 gctttgaaga agtttggcat ctcagaaagt aacacttcag ttctgattgt ttatgttgaa
      481 gatggagaca aacaagtgca tcaggaacac ctagtatctc aagtggaagg ccagcaggtg
      541 cccttggaaa gtcttcctga aataacaagg ctctcagaag tcaggaagat atataaactg
      601 tcatcacaag aagagaggat tgggacatta ttggatggta tcatttgtag aatgtcaaca
      661 aaggatgttt tataagttgt ttaaaatatc aacagaaaat catagaggta attactagct
      721 tttctttccc acttctaaaa ttaacattct catcacagga aaagggaaga aggtactact
      781 accagtccgt ttgttttttt acttcttaaa gataacctct gtcactggtt ttatcattgt
      841 tatttagtcc tctacttata tttcaagacc tttcattttt atacaattgg aataaaaagt
      901 gcaagcacct agagaaggct tcggtgctca aggctcagcc tcagtaatcc ttcatcactt
      961 tgtcactcac cttatacttc tggcttttcc acattgccct tctaagctct gggtcctgag
     1021 agttttacgc ctaagaattt cttttactct aagccaggtg tggtgacttt ttacagtcca
     1081 ctactcagga ggctgaggca ggagaaagct acaagttcaa gatcagccta aagtactatg
     1141 tcagttccct tctcaataaa tacacagcag ttcatttaa
//
