LOCUS       NM_198744               1407 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus TPD52 like 2 (Tpd52l2), mRNA.
ACCESSION   NM_198744 XM_215968
VERSION     NM_198744.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1407)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   2  (bases 1 to 1407)
  AUTHORS   Boutros,R. and Byrne,J.A.
  TITLE     D53 (TPD52L1) is a cell cycle-regulated protein maximally expressed
            at the G2-M transition in breast cancer cells
  JOURNAL   Exp Cell Res 310 (1), 152-165 (2005)
   PUBMED   16112108
REFERENCE   3  (bases 1 to 1407)
  AUTHORS   Cattaruzza,M., Schafer,K. and Hecker,M.
  TITLE     Cytokine-induced down-regulation of zfm1/splicing factor-1 promotes
            smooth muscle cell proliferation
  JOURNAL   J Biol Chem 277 (8), 6582-6589 (2002)
   PUBMED   11748220
REFERENCE   4  (bases 1 to 1407)
  AUTHORS   Byrne,J.A., Nourse,C.R., Basset,P. and Gunning,P.
  TITLE     Identification of homo- and heteromeric interactions between
            members of the breast carcinoma-associated D52 protein family using
            the yeast two-hybrid system
  JOURNAL   Oncogene 16 (7), 873-881 (1998)
   PUBMED   9484778
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC059167.1.
            
            [WARNING] On Jul 18, 2024 this sequence was replaced by
            NM_198744.3.
            
            On Aug 31, 2012 this sequence version replaced NM_198744.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059167.1, EV770534.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1407              BC059167.1         2-1408
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q43"
     gene            1..1407
                     /gene="Tpd52l2"
                     /note="TPD52 like 2"
                     /db_xref="GeneID:296480"
                     /db_xref="RGD:735167"
     exon            1..172
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..816
                     /gene="Tpd52l2"
                     /note="tumor protein D52-like 2"
                     /codon_start=1
                     /product="tumor protein D54"
                     /protein_id="NP_942039.1"
                     /db_xref="GeneID:296480"
                     /db_xref="RGD:735167"
                     /translation="MDSASQDINLNSPNKGVLSDFMTDVPVDPGVVHRTPAVEGLTEV
                     EEEELRAELAKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQG
                     STAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTMGSAISRKLGDMSS
                     YSIRHSISMPVMRNSATFKSFEDRVGTIKSKVVGGRENGSDTLPSSPGSGDQTLPDHA
                     PF"
     exon            173..318
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            319..467
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            468..527
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            528..629
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            630..671
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            672..720
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
     exon            721..1382
                     /gene="Tpd52l2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggcgcgt ccctgattac gtaaacgact gcggccctac agttccactg gctcgtgtgt
       61 accaagctgc cagcttgcag ttctcggggc ttggctcctg tagtacctgc gatcccagca
      121 ccgacgccag ctacacccag ctgccgcctg aacatggatt ctgctagcca agatatcaac
      181 ctgaattctc ctaacaaagg tgtgctgtct gattttatga ctgatgtccc tgttgaccca
      241 ggtgtggtcc accggactcc agctgtagag ggcctgaccg aggtggagga agaagagctc
      301 cgggctgagc ttgctaaggt ggaagaggaa attgtcactc tgcgccaggt gctggcagcc
      361 aaagagaggc actgtggaga gctgaaacgg agactgggcc tctccacatt aggggagctg
      421 aagcagaacc tgtctaggag ctggcatgat gtgcagggct ctactgccta tgtgaaaacg
      481 tctgagaaac ttggagagtg gaatgagaaa gtgacgcagt ctgacctcta caagaagact
      541 caggaaactc tttcacaggc agggcagaaa acatcagctg ctctgtccac catgggctct
      601 gccatcagca ggaagctcgg agatatgagc agctactcca tccgacactc gataagtatg
      661 cctgtcatga ggaactctgc aaccttcaag tcatttgaag atcgagtggg gaccataaag
      721 tctaaggttg tgggcggcag agagaatggc agcgataccc tcccttcctc acctggaagt
      781 ggtgaccaga cattgccgga tcatgcgcct ttctaagcct gccatagctt gccagccaca
      841 gaatacagaa gcacaccctc atcatcacag ctgcaactct gcatgacaga gcaaccagcc
      901 aggacagtga agagctggtt ttgaagacag tcatacccat gttcatgcag atgtggctgc
      961 cttggcatga attagagaac agtcttgtac ataaatgttt tacactaaag ttcatagatg
     1021 aagcagatcg ctgtgccatc ctttccaggg ccacaggaag tggacagggt ggaggggtct
     1081 gaggagtact gaacaggagc ccatgctccc tttgaaggtc tcaccagaat gttaagggaa
     1141 gaagtgttgg gaattaagtg aacaatattt ccttcctgac ctcctcccct agctccaaag
     1201 gaatacactc acctaggtca tattgcatga acacagtttt catatagatt gaggaatgag
     1261 agttctctat tttatagacc ctagaaagga aacataagca actgctacat tcttacagta
     1321 acaacctggc tttggcagaa gcagatttac tattttttta aatgtgatgg acttttcaaa
     1381 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//
