LOCUS       XM_039105546            1415 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tumor protein p53 regulating kinase B
            (Tp53rkb), transcript variant X3, mRNA.
ACCESSION   XM_039105546
VERSION     XM_039105546.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105546.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1415
                     /gene="Tp53rkb"
                     /gene_synonym="Tp53rk; Trp53rk; Trp53rkb"
                     /note="tumor protein p53 regulating kinase B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 8 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 140
                     samples with support for all annotated introns"
                     /db_xref="GeneID:362272"
                     /db_xref="RGD:1304911"
     CDS             551..976
                     /gene="Tp53rkb"
                     /gene_synonym="Tp53rk; Trp53rk; Trp53rkb"
                     /codon_start=1
                     /product="TP53-regulating kinase isoform X1"
                     /protein_id="XP_038961474.1"
                     /db_xref="GeneID:362272"
                     /db_xref="RGD:1304911"
                     /translation="MEEIEDSVTVRDYIQSTMETKQDPQCLLDLARKIGQVLARLHDE
                     DLIHGDLTTSNMLLTRPLEQLHIVLIDFGLSFVSGLPEDKGVDLYVLEKAFLSTHPHT
                     ETVFEAFLKSYGASSKKSDPVLKKLDEVRLRGRKRSMVG"
ORIGIN      
        1 cggcaccttg taaccagcct cttatttaat tcggttaagc ccttacccca gcagaaccag
       61 gcaacatcat tctgaagagt aggaaaccgg aaccaggatg gtagcggcta ctgacgtcag
      121 atgctattgg cgtcatcaag tagaaagctt tgcctagtct gtctttccct cttggattat
      181 acagtgtgtt tccgtggttt gatgcgtgag gatcatgagt tcaaagctaa cctgagatac
      241 acagtgagtt tctgtcttta aaaagtaaag gatttttcta tgctagtaga aaggagcaga
      301 gtatccccac cagaaaggat cccaaactca gcatcgccaa cgagcttcct gagagagcca
      361 aagagagaga agctgttgag taaaagttgc agagcgctca cggagataga aaaagaactt
      421 caggaagggc caagtcgtca gatccgagag gctccgcaga gcgcggaagg gtcgcgaggc
      481 ggaaccactc ttgcagggaa tagctgcccc cgtcgtcttc tttgtggact atgcttctaa
      541 ctgcctatat atggaagaaa tcgaagactc ggtgactgtt cgagattata ttcaatccac
      601 tatggagact aaacaagacc cccaatgcct cttggacttg gccaggaaga tcgggcaggt
      661 tctggccaga ctgcatgacg aggacctcat tcacggggac ctcaccacct ccaacatgct
      721 cctgacacgg cccctggagc agctgcacat cgtgctcatc gacttcgggc tgagttttgt
      781 ctcaggactg ccagaagaca aaggcgtaga cctctatgtc ctggagaaag ccttcctcag
      841 cacgcacccc cacactgaga ctgtgtttga agcctttctg aagagttacg gtgcctcatc
      901 caagaagtcc gatccagtgc tgaagaagtt agatgaggtg cgcctgagag ggcgaaagcg
      961 gtccatggtt gggtagcgga gctgtggtga ctggctcaca gtgaaggatg atgtagacga
     1021 ggctggacct cagcaaagcg tggggtcgtt aagtggtctg tgatcatact gggacaccac
     1081 catccttggc tcactgttct caggggcttc gtgttcatga gatttattct aggcagaact
     1141 gggtgggtag cccaggctag ccttgaattt gtggcagcat cttgcctcag cttgctggga
     1201 ggaggttata aaccaccata cctgactttg cactgattct gtaagaaaca aaacatctat
     1261 gattacattt atttttatat ctttttatat ttatttcgtg tgcctgtgca aatgtgtaca
     1321 tggaggtcag agagtcagat ctctggttct gcattgtaga atctgtcata tggattccag
     1381 ggtgattaaa ttaaattaaa attaaatcca ggtga
//
