LOCUS       NM_001399841            3027 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus Tp53 tumor protein p53 regulating kinase A
            (Tp53rka), mRNA.
ACCESSION   NM_001399841 XM_002729250
VERSION     NM_001399841.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jan 18, 2022 this sequence version replaced XM_002729250.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.15717.1,
                                           SRR26643297.14389.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840108, SAMN12840114
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-284               JAXUCZ010000003.1  174643064-174643347 c
            285-3027            JAXUCZ010000003.1  174638962-174641704 c
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..3027
                     /gene="Tp53rka"
                     /gene_synonym="Trp53rka"
                     /note="Tp53 tumor protein p53 regulating kinase A"
                     /db_xref="GeneID:685619"
                     /db_xref="RGD:1591394"
     exon            1..284
                     /gene="Tp53rka"
                     /gene_synonym="Trp53rka"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..763
                     /gene="Tp53rka"
                     /gene_synonym="Trp53rka"
                     /note="TP53-regulating kinase; rCG32187-like; EKC/KEOPS
                     complex subunit TP53RK; transformation related protein 53
                     regulating kinase A; tumor protein p53 regulating kinase
                     A"
                     /codon_start=1
                     /product="TP53-regulating kinase (p53-related protein
                     kinase) (Nori-2)"
                     /protein_id="NP_001386770.1"
                     /db_xref="GeneID:685619"
                     /db_xref="RGD:1591394"
                     /translation="MAAGSSEAETEAEALAAAQERSRLFLSGLELVQQGAEARVFRGR
                     FQGRAAVVKHRFPKGYRHPELEARLGRRRTVQEARALLRCRRAGIAAPIVFFVDYASN
                     CLYMEEIEDSVTVRDYIQSTMETKQDPQCLLDLARKIGQVLARLHDKDLIHGDLTTSN
                     MLLTRPLEQLHIVLIDFGLSFVSGLPEDKGVDLYVLEKAFLSTHPHTETVFEAFLKSY
                     GASSKKSSPVLKKLDEVRLRGRKRSMVG"
     exon            285..3027
                     /gene="Tp53rka"
                     /gene_synonym="Trp53rka"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgggccaaa ctgctcgaaa ccatggctgc cgggtcttcg gaggcagaga cggaggcgga
       61 ggcgctggcc gcggcgcagg agcggagccg cctcttcctg agcggcctgg agctggtgca
      121 gcagggcgcc gaggctcgag tgttccgtgg ccgcttccag ggccgagcgg ccgtggtgaa
      181 gcaccgcttc cctaagggct accggcaccc ggagctggag gcgcggcttg gccggcggcg
      241 gacggtgcag gaggctcgcg cgctgttgcg ctgccgccgt gctggaatag ctgcccccat
      301 cgtcttcttt gtggactatg cttctaactg cctatatatg gaagaaatcg aagactcggt
      361 gactgttcga gattatattc aatccactat ggagactaaa caagaccccc aatgcctctt
      421 ggacttggcc aggaagatcg ggcaggttct ggccagactg catgacaagg acctcattca
      481 cggggacctc accacctcca acatgctcct gacacggccc ctggagcagc tgcacatcgt
      541 gctcatcgac tttgggctga gttttgtctc aggactgcca gaagacaaag gcgtcgacct
      601 ctatgtcctg gagaaggcct tcctcagcac gcacccccac accgagactg tgtttgaagc
      661 ctttctgaag agttacggtg cctcgtccaa gaagtccagt ccagtgctga agaagttaga
      721 tgaggtgcgc ctgagagggc gaaagcggtc catggtcgga tagtggagct gtggtgactg
      781 gctcacagtg aaggatgatg tagacgaggt tggacctcag caaagcatgg ggtcgttaag
      841 tggtctgtga tcatgctggg acaccaccat ccttggctca ctgttctcag gggcttcgtg
      901 tacatgaggt ttattttagg cagaaccggg tgggtagtcc aggctggctt caaactatgt
      961 aattgaggat aactttgaac ttctgatgct cctgtattca ttggggtgta ggtgtgtgct
     1021 gtcacatctg atttctgtgg tgcctgaggc atactaggca agcattccag caactgagct
     1081 gagtcccaac cctagaactg ggtgtttcag atcaaacaag ctttcccgca gatggctgtg
     1141 ggcctgcata gcaggcagca ctgagctgag aatggtggtg tagtcctaga agaacaaagg
     1201 caggactcag tttgggatag tggttcttgg tctgcccttt aatctggcgg ggtatttgtt
     1261 atatgtatga agactgcttg agggctggag agatggctca gtggttaaga gcactgactg
     1321 ctcttccaga ggtcctgagt tcaaatccca gcaaccacat ggtggctcac aaccatctgg
     1381 agatctgatt ccctttctgt tgtgtctgaa gacagttgac agtgtattca gatacataga
     1441 acaacaaata aacctttaaa aaaaaaaaaa gaaagaaaga aagggctaga gagatggctc
     1501 agcggttaag agcactgact gctcttccag aagtcctgaa ttcaaatccc agcaaccata
     1561 tggtggctca caaccatctg taatgagatc tgatgccctc ttctggtgtg tctgaagaga
     1621 gtgacagtgt atttacatat aataaatctt taaaaaaaga aaagaaaaga aaaaggaaaa
     1681 agaggactgc ttgcagccag ttcagtggga tgtaagcagc actttgagaa agcgaaccga
     1741 ccctgaccgg gatgcagtgg actgctctac agagcttgtt gcaagtgtgg atgtttacat
     1801 ggctgtgttt ggagtttgac ataaaagata tttttgaggg tctggagaga tggccttgta
     1861 gctaggagta cttgcccttc caaaggactc cagtttggtt tccagcacac atgcacagcc
     1921 ctcaggctgt gagggacccc gtgcttccac taccacaggg acctgtgctt atgtgcacat
     1981 gcccctcccc agaacatata catataatta gaatagcgag aagaagttct taaactattt
     2041 tgagtgttgt aaaatgatgg aaaaaaatta cttcattttt ttttttaaaa taggaaagca
     2101 ggcttacagc tttctaacag caaaaacaag ggggataaga gtggttaaga gcagtgactg
     2161 ctcttctaga ggtcccaggt tcaattccca gcaaccacat ggtggctcac aaccatctgt
     2221 aatgggatct gataccctct tctggcatgc agtgttcatg cagatagagc actcatgcac
     2281 ataaataatt taaaaaaaaa aaacagtttt cagatacctg taactgatat tttgctgctc
     2341 tgtatccata ggttgtgaag ctcgtgggta gagaagggag ctggtttaca tctcaggcaa
     2401 tgggaggcag agcagagatg gtgagggact gtagcaggaa atataagaag tcccacgcta
     2461 ttggtgccta ggcaccggca ggcggcctca gtctgtttcc agctggacac cacattaatc
     2521 cttttagcca ggtcctgtct cacccaggct tgctctgcct ctcccaggtt cactccacct
     2581 ggttcactaa gtccaatggc tggcaatggc cgtgtccgcc ccacactctg gttacctgag
     2641 tcaccacgtg aaggaaaaca ccacacagtc ttagtttaga gttaagaagt aacacaatcg
     2701 ctgggcgcag aatctagcat cctaatttta caaactatgt tagaaatcct cattgttcct
     2761 ctatgctgtc tgcagtccaa aaggaagttt ctttttcctg cgttcctgct tcctccaacc
     2821 cggaagtccc gcctcctcgc caagtggttg gtttcttgta atgcttgttt attaggggaa
     2881 aactccacta caagggacct cgtgatgaag ttgataagct gtgtgtacaa agtctgaaga
     2941 cagttctaac agcaccacag ctgctgccac ctcctgagtg tcatgtacta cacagatggc
     3001 caggagagaa tgaagatgtc ccttcag
//
