LOCUS       NM_001399493            2811 bp    mRNA    linear   ROD 17-FEB-2024
DEFINITION  Rattus norvegicus tumor protein p53 inducible protein 11 (Tp53i11),
            transcript variant 1, mRNA.
ACCESSION   NM_001399493 XM_006234570
VERSION     NM_001399493.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000118.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399493.2.
            
            On Jan 10, 2022 this sequence version replaced XM_006234570.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC167758.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-142               JACYVU010000118.1  3011957-3012098
            143-223             JACYVU010000118.1  3021479-3021559
            224-510             JACYVU010000118.1  3022074-3022360
            511-569             JACYVU010000118.1  3022856-3022914
            570-618             JACYVU010000118.1  3023117-3023165
            619-715             JACYVU010000118.1  3023510-3023606
            716-817             JACYVU010000118.1  3024664-3024765
            818-2811            JACYVU010000118.1  3025128-3027121
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q31"
     gene            1..2811
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /note="tumor protein p53 inducible protein 11"
                     /db_xref="GeneID:311209"
                     /db_xref="RGD:1308395"
     exon            1..142
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            143..223
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            224..510
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     CDS             382..951
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /note="p53-induced gene 11 protein; transformation related
                     protein 53 inducible protein 11"
                     /codon_start=1
                     /product="tumor protein p53-inducible protein 11"
                     /protein_id="NP_001386422.1"
                     /db_xref="GeneID:311209"
                     /db_xref="RGD:1308395"
                     /translation="MAAKQPPPLMKKHSQTDLVSRLKTRKILGVGGEDDDGEVHRSKI
                     SQVLGNEIKFAVREPLGLRVWQFLSAMLFSSVAIMALALPDQLYDAVFDGAEVTSKTP
                     IRLYGGALLSISLIMWNALYTAEKVIIRWTLLTEACYFGVQSLVVTATLAETGLMSLG
                     TLLLLASRLLFVIVSIYYYYQVGRKPKKV"
     exon            511..569
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            570..618
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            619..715
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            716..817
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
     exon            818..2811
                     /gene="Tp53i11"
                     /gene_synonym="Trp53i11"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agactcgggc gagcccggca gcgacttgag tccagcttgc cctgccctgc cctgccctgc
       61 ttgcccagcg cggcgccgcg atgtgagact ccccgggccg gagcgtccgc tgggcacgcc
      121 agcaccgcga gcgcagcacc ccgttgtgag gactgaacac aggagaggaa cgctcacctc
      181 agattccaga gcccatctca gcatctgcta actgcctgtt tcagagagga aactgaggca
      241 gccgcaacac catctcctct taggccctga gtagggcctg gccacatcct tctcacccta
      301 cattgggacc tggggtctgg aagtccagca agaacaatgg ctgaggccag tgtctcccca
      361 tgtccctcag cagaagaaaa aatggcagcc aaacagcctc ctccgctcat gaagaagcac
      421 agccagacag atcttgtgag ccgcctgaag accagaaaga tcctgggcgt gggcggggag
      481 gatgatgatg gggaagtgca ccggtcaaag atcagccagg ttttgggcaa cgagataaag
      541 tttgccgtgc gggagcctct ggggctcagg gtctggcagt ttctctctgc tatgctgttc
      601 tccagtgtgg ccatcatggc ccttgccctc cctgaccagc tctacgatgc agtttttgat
      661 ggggctgagg tcacgagcaa gacccccatc cgcctctatg gtggcgccct tcttagcatc
      721 tccctgatca tgtggaatgc actctacaca gccgagaagg tcatcatccg ctggactctg
      781 ctcactgagg cctgctactt cggggtgcag tccttggtgg tcactgccac acttgctgag
      841 acgggcctca tgtccctggg gaccctgctg ctcctggcca gccgcctcct ctttgttatt
      901 gtcagcatct actactatta ccaagtcggc cggaaaccca agaaagtgta gcgggctggg
      961 acctgcctgg gcctggacct gggccagagc agctggggac ttcactgacc atgggtccca
     1021 ggcaggcccg caggcaggca gggtgtacgc acttccttcc ctcccaggca ctccctggaa
     1081 tcagcttgga tctcctggga ttctaggagt gaccagtcag gctgcggcct ctgcatccca
     1141 cccctcaccc ccgtacaggg acaactcctg gccctgtctt tcttggcctc tagactctaa
     1201 cgggcacagt ctagagtgag ttttggggtc tgggctgagt caaggttagt tcctctgcca
     1261 ggaaatcctt tctaggaggt tgtatcagcc ccagaagcag ctctcagcct ctccccatcc
     1321 agaaaccgga tgtgtgagtc tctctctctc tctctctctc tctctctctc tctctcacac
     1381 acacacacac acagtaattc tagagtccca actgaggtca tctagccaag gggattgact
     1441 gcctcccttg agccaagttc cccacccccc gtcctgaaca tctgaccctc tctttggcct
     1501 gctgtaggtt gttctgattc tccggctggc tggctggctg cctgcctgca ccccagagcc
     1561 ccagtccctt cccaacatgc cagggttagc taatatacca caggcctgac agttcctggc
     1621 ccctgcctgt ccataggctc ctagtgcatg aggaattctg aggagaagca aagtgagggc
     1681 atttctttgg catggtctcc aaggcctgca tggctacacc tggctcggtg ccccctccag
     1741 aggctgccct aaggcttacg gggtaaagcc tacagcccct caaatcctac aatggaaaga
     1801 gacaggagtg gatctgccat ccctccacat cccaagagtg ggcctctaga gctgaagata
     1861 cgtccccggt gccaccagcc tgtgtggccc ctccccttag tcctagctcc cagtgccttc
     1921 ccacccttca gcagcaagca cactaagaga tttggcccga ggcctctccc ttctgcaagg
     1981 gggtggtcct ctatgcctga ggaacctttc tctagggcac ctgggctcac agcctcccag
     2041 ggctcagttg ttcctgctgc caagtgcccc atgacaatgg cctgtgccta gtggagggga
     2101 ctcagggaag tttcagtgga agacatgctc agcagtgtcc taggctgctt ctgtaaccaa
     2161 ggtctggcag agtggcgagc ccctgcgcgt tcaggaaggg cccattatgt atatctgcct
     2221 cctgtcactg gctttgcgcc agtccctcag ttcccaactc ttgactcaga gcacaggtcc
     2281 agccactgcc agctcttagt acagtggcag ctgctgtaga gcgggtgaca ttggttgact
     2341 gttctcagag gatttatcct cttgaatcct ctacgaatgc agatatagtc ccaagagaga
     2401 gagtcgtagg aattgaagat gccagccata cacagcctgc agggacatct gccaggcttc
     2461 ccctcagcac gaggaggtgg cagggcctgc ctgggagtgg tgaccagatc tccatggtta
     2521 aactgcagtg atacttttag gtggggtggg ctcaagacca gactgaggct ggcatacaga
     2581 cacctgtggc ctccgggaca cactaagctt ggaaggaggc agcaatggag acaggagccc
     2641 caccctggct ctgagctcag ggtgccctga ctgccccccg tcacagctcc tcttgtgctt
     2701 ctgcctggcc cccaagactg cctctgtcat ggtcactatt tattccttgt tcccttttct
     2761 ttttgtaaga aacagtcaca gaaaaaaaaa aaacaaaaca atgagaaacg a
//
