LOCUS       XM_223012               4360 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tumor protein p53 binding protein, 2
            (Tp53bp2), transcript variant X1, mRNA.
ACCESSION   XM_223012
VERSION     XM_223012.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 22, 2024 this sequence was replaced by
            NM_001427417.1.
            
            On Jan 21, 2021 this sequence version replaced XM_223012.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4360
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4360
                     /gene="Tp53bp2"
                     /note="tumor protein p53 binding protein, 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 21 ESTs, 3 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 109 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:305025"
                     /db_xref="RGD:1305461"
     CDS             252..3638
                     /gene="Tp53bp2"
                     /codon_start=1
                     /product="apoptosis-stimulating of p53 protein 2 isoform
                     X1"
                     /protein_id="XP_223012.6"
                     /db_xref="GeneID:305025"
                     /db_xref="RGD:1305461"
                     /translation="MRFGSKMMPMFLTVYLSNSEQHFTEVPVTPETVCRDVVDLCKEP
                     GESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRNEVRFFLRHERPPNRDIVSGPRS
                     QDAGVKRNGVKVPGEHRRKENGVNSPRLDLTLAELQEMASRQQQQIEAQQQMLATKEQ
                     RLKFLKQQDQRQQQQAAEQEKLKRLREIAESQEAKLKKVRALKGHVEQKRLSNGKLVE
                     EIEQMNSLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDGHHDNQSAVAELDRLYKEL
                     QLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVS
                     PDGNPPQQAVSAPSRVAAVGPYMQSSTMPRMPSRPELLGKPALPDSSLVMQSAEGPMK
                     IQTLPNMRSGAASQSKGPKAHSASSDWNPSSTDLLPSQGSGSALDQVDEGEIALREKE
                     KKVRPFSMFDTVDQCAPPPSFGTLRKNQSSEDILRDAQTVNKNVAKVPPPVPTKPKQI
                     NLPYFGQTAQSSSDVKPDGNPQQLPIAATSMGAKLKPAGPQARVLLSPSAPSGGQDQV
                     LSPASKQESPPAAAVRPFTPQPSKDTFPPAFRKPQTVAASSIYSMYTQHQVPGKNFQQ
                     AVQSASTKTHPRGPHFSSVYGKPVIAAAQNPQQHPENIYSCSQGKPGSPEPETEPVSS
                     VHESHENERIPRPLSPTKLLPFLSNPYRNQSDADLEALRKKLSNAPRPLKKRSSITEP
                     EGPNGPNIQKLLYQRTTIAAMETISVPSYPSKSPSSVTVNPESPIEIPNPYLHVEPEK
                     EAGSLVPEPLSPEDMGSASTENSDMPAPPPGLECVSEGVPDNSTTLQDNTEGTNPEAP
                     HLLEVYLEEYPPYPPPPYPSGEPEVSEEDSARMRPPEVTGQVSLPPGKRTNLRKTGSE
                     RIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT
                     EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAA
                     DKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYQPQHDDELLLKEGDCMAVVR
                     REDEDETEWWWARLNDKEGYVPRNLLGLYPRIKPRQRSLA"
ORIGIN      
        1 ggcgaggagg aggaggagga ggaggaggag gtgggagtcg cgagcgccga gacaaagccg
       61 cgtcccgggg acaggcgagg ggagtgggcc cggggctcgg tgacctctgg atcggctgag
      121 gggactcact cgccgctgcc tcgcaacagg tcggccgccg ggcgcgcgac ctcgttctcg
      181 ctccgcttcc ccgggcccgc gacccccggg ccacttctgc tccgccaggc cgcggccaga
      241 cccccgcttc catgcggttc gggtccaaaa tgatgccgat gttcctgaca gtttacctca
      301 gtaacagcga gcagcacttc acagaagttc ctgttacccc agagaccgta tgcagagatg
      361 tggtggatct gtgcaaagag cctggggaga gcgactgcca tttggctgaa gtgtggtgtg
      421 gctctgagcg cccagttgct gacaatgaac gaatgtttga tgttcttcag cggttcggaa
      481 gtcagaggaa tgaagttcgc ttctttcttc gtcatgaacg cccccctaac agggacatcg
      541 tgagtggacc aagatcccaa gatgcaggtg taaagagaaa tggtgtaaaa gttcctggtg
      601 agcatcggag gaaggagaat ggagttaaca gtcctaggct ggacctgacg cttgctgaac
      661 tccaggaaat ggcatctcgc cagcagcagc agatcgaggc ccagcaacaa atgctggcta
      721 ctaaggagca acgcttaaag tttttaaaac agcaagatca acgtcaacag cagcaagctg
      781 ctgaacagga gaaacttaag aggctcagag aaatcgctga aagtcaggaa gccaagctca
      841 agaaagtgag ggcgctgaag ggccatgtgg agcagaagag gctgagcaac gggaagctgg
      901 tggaggaaat tgaacagatg aacagcttgt tccagcagaa acagagggag ctagttctgg
      961 ctgtgtcaaa agtcgaggag cttacaaggc agctagagat gcttaagaac ggcaggatcg
     1021 acggccacca tgacaaccag tcagccgtgg ccgagctcga ccgtctttac aaggaactgc
     1081 agttaagaaa caaactgaac caagagcaga atgccaaact acagcaacag agggagtgtt
     1141 tgaataagcg caattcagaa gtggcagtca tggataaacg agtcaatgag ctgagggacc
     1201 ggctgtggaa gaagaaggcg gcactgcagc agaaagaaaa tctcccggtt tcacctgatg
     1261 gaaatcctcc ccagcaagca gtgtctgccc cgagtcgcgt ggccgccgta ggcccttaca
     1321 tgcagtcgtc cactatgccg cggatgccct ccagacccga gctcctgggg aagccagcgc
     1381 tgcctgacag ttccttggtc atgcagtccg cagaggggcc gatgaagata cagacactgc
     1441 ccaacatgag gtctggggct gcttcacaaa gtaaaggccc taaagctcac tcagcaagct
     1501 ctgattggaa cccttccagc accgacctct tacccagcca aggctctgga agtgctctgg
     1561 accaagtcga tgaaggggag attgctctga gggagaaaga gaagaaagtg cgtccctttt
     1621 ccatgtttga cacagtggac cagtgtgctc ccccgccctc ctttggtacg ctgaggaaaa
     1681 accagagcag tgaggacatc ttgcgggatg ctcagactgt aaataaaaat gtggctaaag
     1741 taccacctcc tgttcctaca aagccaaaac agattaattt gccttacttt ggacaaactg
     1801 ctcagtcgtc gtctgacgtg aagccggatg gaaaccctca gcagttgccc atagctgcta
     1861 cgtccatggg agccaagctc aagccagcag ggccgcaggc aagggtgctg ctgtctccca
     1921 gtgccccttc gggtggtcaa gaccaagtcc tgtctccagc atctaagcaa gaaagtccac
     1981 cggctgctgc agtccggcct tttacgcccc agccttccaa ggacaccttc cctccagcct
     2041 ttcgaaaacc ccagactgtg gcagcaagct ccatctactc catgtatacc cagcatcagg
     2101 tgccagggaa aaacttccag caggctgtgc agagtgcctc gaccaagacg caccccagag
     2161 gcccccactt ttcaagtgtg tatggcaagc ctgtgatagc tgctgcccag aatccacagc
     2221 aacacccaga gaacatttat tcctgtagcc aggggaagcc tggcagtcca gagcctgaga
     2281 cagagcccgt ttcttcagtt catgagagcc atgaaaatga aaggattccc cgaccactca
     2341 gcccaacgaa attactgcct ttcctatcta acccttaccg aaaccagagt gatgctgact
     2401 tagaagccct acggaaaaaa ctgtctaatg caccaaggcc actaaagaaa cgaagttcca
     2461 ttacagaacc agaaggccct aatgggccaa acattcagaa acttttgtat cagaggacca
     2521 ccatagctgc catggagacc atctcagtcc catcataccc atccaagtca ccaagctcag
     2581 tgactgtcaa cccagagagc ccaatcgaaa tcccaaatcc atatttacac gtggagccag
     2641 agaaggaggc gggctcttta gttcctgagc cactgtcccc agaggatatg gggagtgcca
     2701 gtacagagaa cagtgacatg ccagcccctc ctccaggcct cgagtgtgtg tctgagggcg
     2761 tcccagacaa cagcacgact ctgcaggata acacagaagg gacaaaccca gaggcccccc
     2821 acttactaga agtataccta gaagaatacc ccccataccc accccctcca tacccatctg
     2881 gggaacccga ggtgtccgaa gaagactccg cacgcatgcg cccgcctgaa gtcaccgggc
     2941 aggtgtctct gcctcccgga aaacgaacaa acttgaggaa aactggctca gagcgaattg
     3001 ctcatgggat gagggtgaaa ttcaaccccc tggctttgct cctggattca tctttggagg
     3061 gagagtttga ccttgtacag agaattatct acgaggttga tgacccaagc ctgccaaatg
     3121 atgagggcat cacagcgctg cataatgcag tgtgcgcagg ccacacagag attgtgaagt
     3181 tcctggtaca gttcggtgtg aatgttaacg cagcagacag tgatggatgg accccattgc
     3241 attgtgctgc ctcctgtaac aatgtccaag tgtgtaagtt cctggtggag tcaggagcag
     3301 cagtgtttgc tatgacctac agcgacatgc agactgctgc agacaagtgc gaggaaatgg
     3361 aggaaggcta cacgcagtgc tcccagtttc tctatggggt tcaggagaaa atgggcataa
     3421 tgaacaaagg cgtcatttat gctctgtggg attaccagcc ccagcacgat gatgagctgc
     3481 tcctgaagga aggagactgc atggctgttg tccgcaggga agatgaagac gaaaccgagt
     3541 ggtggtgggc acgccttaac gataaggaag gatatgttcc acgcaacttg ctaggactat
     3601 acccaagaat taaaccaaga cagaggagct tggcctgaag cttgagttaa tgaagaatga
     3661 gttagaagta ccgtgattgt tctgggaaag aaaattcaaa agactgacgt taaccacagt
     3721 gcaccctgag agcaatgaag aatgtgccct ggaggaaaat gaaggagaaa ctgaaggagt
     3781 cagcatgagc aaaggagcag agatgtgagt ccgctccacc ccgtgcgggc accccgtgcg
     3841 ggcaccccgt gcaggcagag cgctcactgt ggcacatgga taggatctgg ttttgtcaga
     3901 aatgggacca tttgttgggc tgtgggaaaa tgagcttctt gtcctgctta gggtgttttt
     3961 ggcactgttc ccattctgct gacctgccag aagggaccag tgccatctgg caccatcttc
     4021 aaccgcctcc gagcactggc aggctttggg ggtccccggc gggtgcagca cacttgtgta
     4081 tgatcacaga agaactgtta gctgcctgtc ggtgagcagt aaccaatgga tgagttcctg
     4141 tagcattgaa gaattgtgcg tatctgaaat actgaactac actacactac ctaatctaag
     4201 ctagagttag aatcttgttt gtaggttgaa tttgaatctg tatttattgt cttttgtatc
     4261 ttggaaatta gagtttgtta tagatttacc tgtatttgtc aggatcatag gtgattttaa
     4321 aaatgattgt aataaaatta aactttatga ctctaagcca
//
