LOCUS       NM_173324               2967 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Rattus norvegicus TOX high mobility group box family member 4
            (Tox4), mRNA.
ACCESSION   NM_173324
VERSION     NM_173324.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Grolimund,L., Aeby,E., Hamelin,R., Armand,F., Chiappe,D.,
            Moniatte,M. and Lingner,J.
  TITLE     A quantitative telomeric chromatin isolation protocol identifies
            different telomeric states
  JOURNAL   Nat Commun 4, 2848 (2013)
   PUBMED   24270157
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Lee,J.H., You,J., Dobrota,E. and Skalnik,D.G.
  TITLE     Identification and characterization of a novel human PP1
            phosphatase complex
  JOURNAL   J Biol Chem 285 (32), 24466-24476 (2010)
   PUBMED   20516061
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC081696.1.
            
            On Sep 16, 2004 this sequence version replaced NM_173324.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081696.1, FQ212245.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..2967
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /note="TOX high mobility group box family member 4"
                     /db_xref="GeneID:286990"
                     /db_xref="RGD:708449"
     exon            1..62
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..1916
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /note="epidermal Langerhans cell protein LCP1"
                     /codon_start=1
                     /product="TOX high mobility group box family member 4"
                     /protein_id="NP_775446.2"
                     /db_xref="GeneID:286990"
                     /db_xref="RGD:708449"
                     /translation="MEFPGGNDNYLTITGPSHPFLSGAETFHTPSLGDEEFEIPPISL
                     DSDPSLAVSDVVGHFDDLADPSSSQDGSFSAQYGVQTLDMPVGMTHGLMEQGGGLLSG
                     GLTMDLDHSIGTQYSANPPVTIDVPMTDMTSGLMGHSQLTTIDQSELSSQLGLSLGGG
                     TILPPAQSPEDRLSTTPSPTNSLHEDGVDDFRRQLPAQKTVVVETGKKQKAPKKRKKK
                     DPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKT
                     EAAKKEYLKALAAYKDNQECQATVETVELDPVPQSQTPSPPPVTTADPASPAPASTES
                     PALSPCIVVNSTLSSYVANQASSGPGGQPNITKLIITKQMLPSSITMSQGGMVTVIPA
                     TVVTSRGLQLGQTSTATIQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMP
                     QPPTQQQVTILQQPPPLQAMQQPPPQKVRINLQQQPPPLQSKIVPPPALKMQATVLPP
                     TVESSPEQPMNSSPEAHTVEATSPETICEMIADVVPEVESPSQMDVELVSGSPVTLSP
                     QPRCVRSGCENPPVISKDWDNEYCSNECVVKHCRDVFLAWVASRNPNSVVFVK"
     exon            63..131
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            132..374
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            375..635
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            636..866
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            867..947
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1691
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            1692..1855
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
     exon            1856..2946
                     /gene="Tox4"
                     /gene_synonym="RGD708449"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggtgggagc gatgcggacg cggagtcgct gagacgctgg tggtggtgtt gtgaagatgg
       61 agtttcccgg aggaaatgac aattacctga cgatcactgg gccctcgcac cctttcctgt
      121 caggggccga gacattccat acaccaagct tgggcgatga ggaatttgaa atcccaccta
      181 tctccttgga ctctgatccc tcactggctg tttcagatgt ggttggccac tttgatgacc
      241 tggcagaccc ctcctcttcc caggatggca gcttctcagc tcaatacggg gtccagacat
      301 tggacatgcc tgtgggcatg acccatggcc tgatggagca gggcgggggg ctcctgagtg
      361 ggggcttgac tatggacctg gaccattcca taggaactca gtatagtgcc aacccacctg
      421 ttacaattga tgtaccgatg acagacatga catctggctt aatgggacac agccagttga
      481 ccactattga tcagtcagaa ctgagttctc aacttggttt gagtttagga ggtggcacca
      541 tcttgccacc cgcccagtca cctgaggatc gtctttcaac tactccttca cctaccaatt
      601 cacttcatga ggatggtgtt gatgatttcc ggaggcaact tcctgcccag aagacagtgg
      661 tagtggaaac agggaaaaag caaaaggctc ccaagaagag aaaaaagaaa gaccctaatg
      721 aacctcaaaa gccagtctct gcgtatgcac tgttcttccg agatactcag gcagccatca
      781 agggacagaa cccaaatgca acctttgggg aggtttccaa gattgtggct tccatgtggg
      841 acagtcttgg agaagagcaa aaacaggtgt acaagcggaa aactgaagct gccaagaaag
      901 agtatctcaa ggcactagct gcttataaag acaaccagga gtgtcaggct actgtggaaa
      961 cagtggaatt ggatcctgtg ccacagtcac agactccttc accacctcct gtgactactg
     1021 ctgacccagc atctccagca ccagcctcaa cggagtcccc tgctttgtcc ccttgcattg
     1081 tagttaattc cacgctttca tcttacgtgg caaaccaggc atcttctggg cctggaggtc
     1141 agcccaatat caccaaattg attattacca aacaaatgtt gccttcttct attaccatgt
     1201 ctcaaggagg aatggttact gttatcccag ccacagtggt tacctcccgt gggctccagc
     1261 tgggccaaac aagtacagct actattcagc caagccagca ggcccagatt gtcactcggt
     1321 cagtgttgca ggcagcagca gctgccgctg cttctatgca actgcctcca ccccgcctgc
     1381 agcctcctcc attgcaacag atgcctcagc ccccaactca acagcaagtc accattctcc
     1441 agcaacctcc tccccttcag gccatgcagc agcctccacc tcagaaagtt agaatcaacc
     1501 tacagcagca gccgcctcct ctgcagagca agatcgtgcc tccacccgct ctgaaaatgc
     1561 aggctacagt gctccctcca actgtagaaa gcagccctga gcagcctatg aacagcagcc
     1621 ccgaggccca cacagtagag gcaacctctc ctgagacaat ctgtgaaatg attgcagatg
     1681 tagttcctga ggtggagtcc ccttcccaga tggatgttga attggtgagt ggatcccctg
     1741 tgacactgtc ccctcagcct cgatgtgtga ggtctggttg cgagaaccct cctgttatca
     1801 gtaaggactg ggacaacgaa tattgcagca atgagtgtgt ggtgaagcac tgcagggatg
     1861 tattcttggc ctgggtggcc tctagaaatc caaactctgt ggtatttgtg aagtagcctt
     1921 cctcttctcc aagccttgaa gattcatctg ccggacatga gtcccaaagc ctgcttttga
     1981 cacataagct gggcttctgg tagtgcctga cctttaccaa tagtccttca tgcctccacc
     2041 tcccttttct ttcttcagca gaggccagac tatgtcgcag agccagcaaa tttactgtaa
     2101 tttagaattg ctttttactc aactgtaaac aaaattacca gcttatcaca agcacaggga
     2161 agggtgatgg gagcagatca taggggttat tagaagaaat gtcagtaaaa ttgtcagaag
     2221 acttgactaa atgttattgg gagagtgctt agctttgttc taggaggaaa cagcactgag
     2281 ataataaagg cttaggatta cagctcagtg gtaaagtgca ttgggtttaa atcccaaatg
     2341 aaggagaaat gaaaatactg atttaaaata aaatgtgtaa taacctacta ttattaatat
     2401 acacagtgat tcaaggatga aggcttatag acctggagtt atggcttagc actacaaagc
     2461 tctgagttca gaccccaggc aggaagatca ggagctcaag gtcatccaaa acatggtggc
     2521 ccatgccttt aatcctagta ctttggaggt ggctatagga agatttttga gttaaaggcc
     2581 aatctgaact tacatagtag actttgtctc aaaaaacaga ctgggtgtgg tggcgctctc
     2641 ctctactcct agaacctggg aggccagtgg caggctggat ctctgagttt gaagttagcc
     2701 agggttacct agtgaggtcc tatctttgcc ctccctgccc tccctgccct ccctgccctt
     2761 gacagaaaca aattctgctt ctgtctcagt cttagcacat tgaactagag gggaaagata
     2821 tcatccagaa ctctctctct ataagtattt ctttacctga cttggttacc agttttgcat
     2881 gtaagaagca gaactctata accctaataa gaggtttaca aagtaaagaa tctgtgtttg
     2941 atgaaaaaaa aaaaaaaaaa aaaaaaa
//
