LOCUS       NM_001398960             632 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus translocase of outer mitochondrial membrane 5
            (Tomm5), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001398960 XM_001055588
VERSION     NM_001398960.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 632)
  AUTHORS   Ellenrieder,L., Martensson,C.U. and Becker,T.
  TITLE     Biogenesis of mitochondrial outer membrane proteins, problems and
            diseases
  JOURNAL   Biol Chem 396 (11), 1199-1213 (2015)
   PUBMED   25980382
  REMARK    Review article
REFERENCE   2  (bases 1 to 632)
  AUTHORS   Wenz,L.S., Opalinski,L., Wiedemann,N. and Becker,T.
  TITLE     Cooperation of protein machineries in mitochondrial protein sorting
  JOURNAL   Biochim Biophys Acta 1853 (5), 1119-1129 (2015)
   PUBMED   25633533
  REMARK    Review article
REFERENCE   3  (bases 1 to 632)
  AUTHORS   Schulz,C., Schendzielorz,A. and Rehling,P.
  TITLE     Unlocking the presequence import pathway
  JOURNAL   Trends Cell Biol 25 (5), 265-275 (2015)
   PUBMED   25542066
  REMARK    Review article
REFERENCE   4  (bases 1 to 632)
  AUTHORS   Hohr,A.I., Straub,S.P., Warscheid,B., Becker,T. and Wiedemann,N.
  TITLE     Assembly of beta-barrel proteins in the mitochondrial outer
            membrane
  JOURNAL   Biochim Biophys Acta 1853 (1), 74-88 (2015)
   PUBMED   25305573
  REMARK    Review article
REFERENCE   5  (bases 1 to 632)
  AUTHORS   Kato,H. and Mihara,K.
  TITLE     Identification of Tom5 and Tom6 in the preprotein translocase
            complex of human mitochondrial outer membrane
  JOURNAL   Biochem Biophys Res Commun 369 (3), 958-963 (2008)
   PUBMED   18331822
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Dec 28, 2021 this sequence version replaced XM_001055588.7.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ211732.1, CF978757.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840106, SAMN12840107
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-187               JAXUCZ010000005.1  64160671-64160857   c
            188-632             JAXUCZ010000005.1  64158026-64158470   c
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..632
                     /gene="Tomm5"
                     /note="translocase of outer mitochondrial membrane 5"
                     /db_xref="GeneID:680080"
                     /db_xref="RGD:1596808"
     exon            1..187
                     /gene="Tomm5"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..222
                     /gene="Tomm5"
                     /note="translocase of outer mitochondrial membrane 5
                     homolog; translocase of outer mitochondrial membrane 5
                     homolog-like"
                     /codon_start=1
                     /product="mitochondrial import receptor subunit TOM5
                     homolog"
                     /protein_id="NP_001385889.1"
                     /db_xref="GeneID:680080"
                     /db_xref="RGD:1596808"
                     /translation="MFRIEGLAPKLDPEEMKRKMREDVVSSIRNFLIYVALLRVTPYI
                     LKKLDSI"
     exon            188..632
                     /gene="Tomm5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtgcaagg cggccgctgg agcagagcaa gctgccgctc tcgcaagctt tggaggcaga
       61 gctgcaatgt tccggatcga aggtctcgcg ccgaagttgg acccggagga gatgaaacgg
      121 aagatgcgtg aggatgtggt ctcctccatt cggaacttcc tcatctacgt ggccctgctg
      181 cgagtcactc catatatctt aaagaagctg gatagcatat gaggcttggg agtcccatgg
      241 atgcatggca tgaagaacca cctggtgaca gcttctcctc ctgtctgcag atgaaatggc
      301 ccagaaaggt gtaagactga ttaaacggac attaaaaaaa cgaaaacaaa caaacaaaaa
      361 aaaaactact tgttaagaac aagttgggct ttgagaactg acctccatag atgaaatata
      421 aaactacttg ggaagtgcaa atatccacct ctgtgagtgt tgccggaatt gtagataatg
      481 ccagactctg aggggcctat gtctcagcag tcatttctgt ttacgacttc tgttcaaagt
      541 gttacttggg aagagtctgt ttggaagtca gcatacaccc acaatgactt taagcacagt
      601 ctatattttt aataaacatt ctgatgaagg aa
//
