LOCUS       NP_001008366             492 aa            linear   ROD 30-MAR-2024
DEFINITION  target of Myb1 membrane trafficking protein [Rattus norvegicus].
ACCESSION   NP_001008366 XP_341648
VERSION     NP_001008366.1
DBSOURCE    REFSEQ: accession NM_001008365.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 492)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   2  (residues 1 to 492)
  AUTHORS   Katoh,Y., Imakagura,H., Futatsumori,M. and Nakayama,K.
  TITLE     Recruitment of clathrin onto endosomes by the Tom1-Tollip complex
  JOURNAL   Biochem Biophys Res Commun 341 (1), 143-149 (2006)
   PUBMED   16412388
REFERENCE   3  (residues 1 to 492)
  AUTHORS   Seet,L.F., Liu,N., Hanson,B.J. and Hong,W.
  TITLE     Endofin recruits TOM1 to endosomes
  JOURNAL   J Biol Chem 279 (6), 4670-4679 (2004)
   PUBMED   14613930
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000019.1.
            
            On Dec 16, 2004 this sequence version replaced XP_341648.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083873.1, SRR26643292.60632.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19p11"
     Protein         1..492
                     /product="target of Myb1 membrane trafficking protein"
                     /note="target of Myb protein 1; target of myb1 homolog"
                     /calculated_mol_wt=53958
     Region          12..148
                     /region_name="VHS_Tom1"
                     /note="VHS (Vps27/Hrs/STAM) domain of Target of Myb
                     protein 1; cd16995"
                     /db_xref="CDD:340792"
     Site            order(30..31,34,38,79..80)
                     /site_type="other"
                     /note="putative intraprotein/interprotein binding site
                     [polypeptide binding]"
                     /db_xref="CDD:340792"
     Site            order(48,52,55..56)
                     /site_type="active"
                     /note="putative membrane binding residues [active]"
                     /db_xref="CDD:340792"
     Region          214..308
                     /region_name="GAT_TOM1"
                     /note="canonical GAT domain found in target of Myb protein
                     1 (Tom1); cd14236"
                     /db_xref="CDD:260094"
     Site            order(225..226,229..230,232..233,236..237,240,253,
                     256..257)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:260094"
     CDS             1..492
                     /gene="Tom1"
                     /coded_by="NM_001008365.2:72..1550"
                     /db_xref="GeneID:361370"
                     /db_xref="RGD:1308024"
ORIGIN      
        1 mdfllgnpfs spvgqrieka tdgslqsedw alnmeicdii neteegpkda fravkkrivg
       61 nknfhevmla ltvletcvkn cghrfhvlva sqdfvenvlv rtilpknnpp tivhdkvlnl
      121 iqswadafrs spdltgvvav yedlrrkgle fpmtdldmls pihtpqrtvf nsetpsrqnp
      181 vvsnsshrgd lsqhatplpt pavlpgdspi tptpeqigkl rselemvngn vrvmsemlte
      241 lvptqvepad lellqelnrt cramqqrile liprisneql teellmindn lnnvflrher
      301 ferfrtgqta kasgeaelaa dlidmgpdpa atsnlssqla gvdlgssrvr aglqsleasg
      361 hleddfdmfa ltrgssladq rkgvkyeapq ttdglagald arqqstgaip atqarimedi
      421 eqwlstdvgs saeepsgvts eefdkfleer akaadrlpnl aspsaegppr pcpgaaprrk
      481 tqekdddvlf al
//
