LOCUS       XM_039101004             915 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X32, mRNA.
ACCESSION   XM_039101004
VERSION     XM_039101004.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..915
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 20 ESTs, 25 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 10 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             17..736
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X32"
                     /protein_id="XP_038956932.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEEAQEEEEKPRPKLTAPKIPEGEKVDFDDIQKKR
                     QNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERERQNRL
                     AEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKIL
                     AERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDKFEFGEKLKRQKYDIMTVRARVEM
                     LAKFSKKAGATAKGKVGGRWK"
ORIGIN      
        1 acaacccacc gccactatgt ctgacgagga aactgaacaa gttgaggagg aggcccagga
       61 ggaagaggag aaaccaagac ccaaacttac tgctcctaag atcccggaag gagagaaagt
      121 agacttcgat gatatccaga agaagcgtca gaacaaggac ctcatggagc tccaggccct
      181 cattgacagc cactttgaag ctagaaagaa agaagaagag gagctaattg cacttaagga
      241 aagaattgaa aagcgccgtg cagagagggc tgagcagcaa aggattcgcg ctgagaagga
      301 gcgggagcgc cagaacagac tggcggagga gaaggccaga agagaggagg aagatgccaa
      361 gaggagagct gaagatgact tgaagaagaa aaaggctctg tcctctatgg gtgccaacta
      421 cagcagctac ctggccaagg ctgaccagaa gagaggcaag aaacagacag cccgggaaat
      481 gaaaaagaag attcttgctg aaaggcgcaa acctctgaac attgaccatc ttagtgatga
      541 taagctgagg gacaaggcca aggaactctg ggataccttg taccaactgg agactgacaa
      601 atttgagttt ggggagaagc tgaaacgtca gaaatacgat atcatgactg tccgggccag
      661 agtggagatg ctggccaagt tcagcaagaa ggccggtgcc acagccaagg gcaaagtcgg
      721 cgggcgctgg aagtaaacga gccaagaggt gccctgcagc agagaccatc aaccctgact
      781 cttgccaggg tcccttattc cagctctgta ttctccaacc ctcatgccca ggcacttttg
      841 ggaactcagg gcccaccctg ctgcaatgtc ctcgccctct ggggtctaga aataaagtta
      901 tcagactccc ctcta
//
