LOCUS       XM_039101000             984 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X29, mRNA.
ACCESSION   XM_039101000
VERSION     XM_039101000.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..984
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 26 ESTs, 1 long SRA read, 23 Proteins, and
                     95% coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             17..805
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X29"
                     /protein_id="XP_038956928.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEEAQEEEVQEEEEVQEDAVAEEEREEDEEEEKPR
                     PKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIEK
                     RRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSS
                     YLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDK
                     FEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGATAKGKVGGRWK"
ORIGIN      
        1 acaacccacc gccactatgt ctgacgagga aactgaacaa gttgaggagg aggcccagga
       61 ggaagaagtc caggaggaag aggaagtcca agaagatgct gtcgccgagg aggagcggga
      121 ggaggacgag gaagaggaga aaccaagacc caaacttact gctcctaaga tcccggaagg
      181 agagaaagta gacttcgatg atatccagaa gaagcgtcag aacaaggacc tcatggagct
      241 ccaggccctc attgacagcc actttgaagc tagaaagaaa gaagaagagg agctaattgc
      301 acttaaggaa agaattgaaa agcgccgtgc agagagggct gagcagcaaa ggattcgcgc
      361 tgagaaggag cgggagcgcc agaacagact ggcggaggag aaggccagaa gagaggagga
      421 agatgccaag aggagagctg aagatgactt gaagaagaaa aaggctctgt cctctatggg
      481 tgccaactac agcagctacc tggccaaggc tgaccagaag agaggcaaga aacagacagc
      541 ccgggaaatg aaaaagaaga ttcttgctga aaggcgcaaa cctctgaaca ttgaccatct
      601 tagtgatgat aagctgaggg acaaggccaa ggaactctgg gataccttgt accaactgga
      661 gactgacaaa tttgagtttg gggagaagct gaaacgtcag aaatacgata ttaccaccct
      721 caggagccgc attgaccaag cccagaagca cagcaagaag gccggtgcca cagccaaggg
      781 caaagtcggc gggcgctgga agtaaacgag ccaagaggtg ccctgcagca gagaccatca
      841 accctgactc ttgccagggt cccttattcc agctctgtat tctccaaccc tcatgcccag
      901 gcacttttgg gaactcaggg cccaccctgc tgcaatgtcc tcgccctctg gggtctagaa
      961 ataaagttat cagactcccc tcta
//
