LOCUS       XM_039100996            1179 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X22, mRNA.
ACCESSION   XM_039100996
VERSION     XM_039100996.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1179
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 13 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             19..1164
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X22"
                     /protein_id="XP_038956924.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEVQEEEKPRPKLTAPKIPEGEKVDFDD
                     IQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERE
                     RQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREM
                     KKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDKFEFGEKLKRQKYDIMTVR
                     ARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKSAGAGSKRAKRCPAAETINPDSCQ
                     GPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRNKVIRLPSTVYVLCYHAQGTWRGW
                     EVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHMVLHPNAPPELGL"
ORIGIN      
        1 acacaaccca ccgccactat gtctgacgag gaaactgaac aagttgagga acagtacgaa
       61 gaggaagagg aagtccaaga agaggagaaa ccaagaccca aacttactgc tcctaagatc
      121 ccggaaggag agaaagtaga cttcgatgat atccagaaga agcgtcagaa caaggacctc
      181 atggagctcc aggccctcat tgacagccac tttgaagcta gaaagaaaga agaagaggag
      241 ctaattgcac ttaaggaaag aattgaaaag cgccgtgcag agagggctga gcagcaaagg
      301 attcgcgctg agaaggagcg ggagcgccag aacagactgg cggaggagaa ggccagaaga
      361 gaggaggaag atgccaagag gagagctgaa gatgacttga agaagaaaaa ggctctgtcc
      421 tctatgggtg ccaactacag cagctacctg gccaaggctg accagaagag aggcaagaaa
      481 cagacagccc gggaaatgaa aaagaagatt cttgctgaaa ggcgcaaacc tctgaacatt
      541 gaccatctta gtgatgataa gctgagggac aaggccaagg aactctggga taccttgtac
      601 caactggaga ctgacaaatt tgagtttggg gagaagctga aacgtcagaa atacgatatc
      661 atgactgtcc gggccagagt ggagatgctg gccaagttat taccaccctc aggagccgca
      721 ttgaccaagc ccagaagcac agcaagaagg ccggtgccac agccaagggc aaagtcggcg
      781 ggcgctggaa gtaaacgagc caagaggtgc cctgcagcag agaccatcaa ccctgactct
      841 tgccagggtc ccttattcca gctctgtatt ctccaaccct catgcccagg cacttttggg
      901 aactcagggc ccaccctgct gcaatgtcct cgccctctgg ggtctagaaa taaagttatc
      961 agactcccct ctactgtcta tgtgttgtgt tatcatgcac aggggacctg gagaggttgg
     1021 gaggtagtgc tgcaggacag gagcaccatg ggagtgcgcc tcagaacagc cccgggaaaa
     1081 ctgaggtatc ttactgctat tagcaactgc ggcaaactgc acatggtgtt gcaccccaat
     1141 gcccctccag aacttggtct gtagcctctt ttgtcagag
//
