LOCUS       XM_039100972            1268 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X13, mRNA.
ACCESSION   XM_039100972
VERSION     XM_039100972.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1268
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 16 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             78..1253
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X13"
                     /protein_id="XP_038956900.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEAQEEAPEPEEVQEEEKPRPKLTAPKI
                     PEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQ
                     QRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQK
                     RGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDKFEFGEKLK
                     RQKYDIMTVRARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKSAGAGSKRAKRCPA
                     AETINPDSCQGPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRNKVIRLPSTVYVLC
                     YHAQGTWRGWEVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHMVLHPNAPPELGL"
ORIGIN      
        1 gtgcctgctg ctggtcctgt ccacaaggag cccccaacct ttctcagact caactgcaga
       61 cacaacccac cgccactatg tctgacgagg aaactgaaca agttgaggaa cagtacgaag
      121 aggaagagga ggcccaggag gaagccccgg aaccagagga agtccaagaa gaggagaaac
      181 caagacccaa acttactgct cctaagatcc cggaaggaga gaaagtagac ttcgatgata
      241 tccagaagaa gcgtcagaac aaggacctca tggagctcca ggccctcatt gacagccact
      301 ttgaagctag aaagaaagaa gaagaggagc taattgcact taaggaaaga attgaaaagc
      361 gccgtgcaga gagggctgag cagcaaagga ttcgcgctga gaaggagcgg gagcgccaga
      421 acagactggc ggaggagaag gccagaagag aggaggaaga tgccaagagg agagctgaag
      481 atgacttgaa gaagaaaaag gctctgtcct ctatgggtgc caactacagc agctacctgg
      541 ccaaggctga ccagaagaga ggcaagaaac agacagcccg ggaaatgaaa aagaagattc
      601 ttgctgaaag gcgcaaacct ctgaacattg accatcttag tgatgataag ctgagggaca
      661 aggccaagga actctgggat accttgtacc aactggagac tgacaaattt gagtttgggg
      721 agaagctgaa acgtcagaaa tacgatatca tgactgtccg ggccagagtg gagatgctgg
      781 ccaagttatt accaccctca ggagccgcat tgaccaagcc cagaagcaca gcaagaaggc
      841 cggtgccaca gccaagggca aagtcggcgg gcgctggaag taaacgagcc aagaggtgcc
      901 ctgcagcaga gaccatcaac cctgactctt gccagggtcc cttattccag ctctgtattc
      961 tccaaccctc atgcccaggc acttttggga actcagggcc caccctgctg caatgtcctc
     1021 gccctctggg gtctagaaat aaagttatca gactcccctc tactgtctat gtgttgtgtt
     1081 atcatgcaca ggggacctgg agaggttggg aggtagtgct gcaggacagg agcaccatgg
     1141 gagtgcgcct cagaacagcc ccgggaaaac tgaggtatct tactgctatt agcaactgcg
     1201 gcaaactgca catggtgttg caccccaatg cccctccaga acttggtctg tagcctcttt
     1261 tgtcagag
//
