LOCUS       XM_039100967            1284 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X12, mRNA.
ACCESSION   XM_039100967
VERSION     XM_039100967.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1284
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 19 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             94..1269
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X12"
                     /protein_id="XP_038956895.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEAQEEEVQEEAPEPEEKPRPKLTAPKI
                     PEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQ
                     QRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQK
                     RGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDKFEFGEKLK
                     RQKYDIMTVRARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKSAGAGSKRAKRCPA
                     AETINPDSCQGPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRNKVIRLPSTVYVLC
                     YHAQGTWRGWEVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHMVLHPNAPPELGL"
ORIGIN      
        1 gtgaggccgt tggacagtgc ctgctgctgg tcctgtccac aaggagcccc caacctttct
       61 cagactcaac tgcagacaca acccaccgcc actatgtctg acgaggaaac tgaacaagtt
      121 gaggaacagt acgaagagga agaggaggcc caggaggaag aagtccagga ggaagccccg
      181 gaaccagagg agaaaccaag acccaaactt actgctccta agatcccgga aggagagaaa
      241 gtagacttcg atgatatcca gaagaagcgt cagaacaagg acctcatgga gctccaggcc
      301 ctcattgaca gccactttga agctagaaag aaagaagaag aggagctaat tgcacttaag
      361 gaaagaattg aaaagcgccg tgcagagagg gctgagcagc aaaggattcg cgctgagaag
      421 gagcgggagc gccagaacag actggcggag gagaaggcca gaagagagga ggaagatgcc
      481 aagaggagag ctgaagatga cttgaagaag aaaaaggctc tgtcctctat gggtgccaac
      541 tacagcagct acctggccaa ggctgaccag aagagaggca agaaacagac agcccgggaa
      601 atgaaaaaga agattcttgc tgaaaggcgc aaacctctga acattgacca tcttagtgat
      661 gataagctga gggacaaggc caaggaactc tgggatacct tgtaccaact ggagactgac
      721 aaatttgagt ttggggagaa gctgaaacgt cagaaatacg atatcatgac tgtccgggcc
      781 agagtggaga tgctggccaa gttattacca ccctcaggag ccgcattgac caagcccaga
      841 agcacagcaa gaaggccggt gccacagcca agggcaaagt cggcgggcgc tggaagtaaa
      901 cgagccaaga ggtgccctgc agcagagacc atcaaccctg actcttgcca gggtccctta
      961 ttccagctct gtattctcca accctcatgc ccaggcactt ttgggaactc agggcccacc
     1021 ctgctgcaat gtcctcgccc tctggggtct agaaataaag ttatcagact cccctctact
     1081 gtctatgtgt tgtgttatca tgcacagggg acctggagag gttgggaggt agtgctgcag
     1141 gacaggagca ccatgggagt gcgcctcaga acagccccgg gaaaactgag gtatcttact
     1201 gctattagca actgcggcaa actgcacatg gtgttgcacc ccaatgcccc tccagaactt
     1261 ggtctgtagc ctcttttgtc agag
//
