LOCUS       XM_039100944            1299 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X8, mRNA.
ACCESSION   XM_039100944
VERSION     XM_039100944.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1299
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 21 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             94..1284
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X8"
                     /protein_id="XP_038956872.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEAQEEEVQEEAPEPEEVQEEEKPRPKL
                     TAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRA
                     ERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYSSYLA
                     KADQKRGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETDKFEF
                     GEKLKRQKYDIMTVRARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKSAGAGSKRA
                     KRCPAAETINPDSCQGPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRNKVIRLPST
                     VYVLCYHAQGTWRGWEVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHMVLHPNAPP
                     ELGL"
ORIGIN      
        1 gtgaggccgt tggacagtgc ctgctgctgg tcctgtccac aaggagcccc caacctttct
       61 cagactcaac tgcagacaca acccaccgcc actatgtctg acgaggaaac tgaacaagtt
      121 gaggaacagt acgaagagga agaggaggcc caggaggaag aagtccagga ggaagccccg
      181 gaaccagagg aagtccaaga agaggagaaa ccaagaccca aacttactgc tcctaagatc
      241 ccggaaggag agaaagtaga cttcgatgat atccagaaga agcgtcagaa caaggacctc
      301 atggagctcc aggccctcat tgacagccac tttgaagcta gaaagaaaga agaagaggag
      361 ctaattgcac ttaaggaaag aattgaaaag cgccgtgcag agagggctga gcagcaaagg
      421 attcgcgctg agaaggagcg ggagcgccag aacagactgg cggaggagaa ggccagaaga
      481 gaggaggaag atgccaagag gagagctgaa gatgacttga agaagaaaaa ggctctgtcc
      541 tctatgggtg ccaactacag cagctacctg gccaaggctg accagaagag aggcaagaaa
      601 cagacagccc gggaaatgaa aaagaagatt cttgctgaaa ggcgcaaacc tctgaacatt
      661 gaccatctta gtgatgataa gctgagggac aaggccaagg aactctggga taccttgtac
      721 caactggaga ctgacaaatt tgagtttggg gagaagctga aacgtcagaa atacgatatc
      781 atgactgtcc gggccagagt ggagatgctg gccaagttat taccaccctc aggagccgca
      841 ttgaccaagc ccagaagcac agcaagaagg ccggtgccac agccaagggc aaagtcggcg
      901 ggcgctggaa gtaaacgagc caagaggtgc cctgcagcag agaccatcaa ccctgactct
      961 tgccagggtc ccttattcca gctctgtatt ctccaaccct catgcccagg cacttttggg
     1021 aactcagggc ccaccctgct gcaatgtcct cgccctctgg ggtctagaaa taaagttatc
     1081 agactcccct ctactgtcta tgtgttgtgt tatcatgcac aggggacctg gagaggttgg
     1141 gaggtagtgc tgcaggacag gagcaccatg ggagtgcgcc tcagaacagc cccgggaaaa
     1201 ctgaggtatc ttactgctat tagcaactgc ggcaaactgc acatggtgtt gcaccccaat
     1261 gcccctccag aacttggtct gtagcctctt ttgtcagag
//
