LOCUS       XM_039100925            1303 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X5, mRNA.
ACCESSION   XM_039100925
VERSION     XM_039100925.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1303
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 18 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             86..1288
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X5"
                     /protein_id="XP_038956853.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEAQEEEEVQEDAVAEEEREEDEEEEKP
                     RPKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALKERIE
                     KRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMGANYS
                     SYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQLETD
                     KFEFGEKLKRQKYDIMTVRARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKSAGAG
                     SKRAKRCPAAETINPDSCQGPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRNKVIR
                     LPSTVYVLCYHAQGTWRGWEVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHMVLHP
                     NAPPELGL"
ORIGIN      
        1 gttggacagt gcctgctgct ggtcctgtcc acaaggagcc cccaaccttt ctcagactca
       61 actgcagaca caacccaccg ccactatgtc tgacgaggaa actgaacaag ttgaggaaca
      121 gtacgaagag gaagaggagg cccaggagga agaggaagtc caagaagatg ctgtcgccga
      181 ggaggagcgg gaggaggacg aggaagagga gaaaccaaga cccaaactta ctgctcctaa
      241 gatcccggaa ggagagaaag tagacttcga tgatatccag aagaagcgtc agaacaagga
      301 cctcatggag ctccaggccc tcattgacag ccactttgaa gctagaaaga aagaagaaga
      361 ggagctaatt gcacttaagg aaagaattga aaagcgccgt gcagagaggg ctgagcagca
      421 aaggattcgc gctgagaagg agcgggagcg ccagaacaga ctggcggagg agaaggccag
      481 aagagaggag gaagatgcca agaggagagc tgaagatgac ttgaagaaga aaaaggctct
      541 gtcctctatg ggtgccaact acagcagcta cctggccaag gctgaccaga agagaggcaa
      601 gaaacagaca gcccgggaaa tgaaaaagaa gattcttgct gaaaggcgca aacctctgaa
      661 cattgaccat cttagtgatg ataagctgag ggacaaggcc aaggaactct gggatacctt
      721 gtaccaactg gagactgaca aatttgagtt tggggagaag ctgaaacgtc agaaatacga
      781 tatcatgact gtccgggcca gagtggagat gctggccaag ttattaccac cctcaggagc
      841 cgcattgacc aagcccagaa gcacagcaag aaggccggtg ccacagccaa gggcaaagtc
      901 ggcgggcgct ggaagtaaac gagccaagag gtgccctgca gcagagacca tcaaccctga
      961 ctcttgccag ggtcccttat tccagctctg tattctccaa ccctcatgcc caggcacttt
     1021 tgggaactca gggcccaccc tgctgcaatg tcctcgccct ctggggtcta gaaataaagt
     1081 tatcagactc ccctctactg tctatgtgtt gtgttatcat gcacagggga cctggagagg
     1141 ttgggaggta gtgctgcagg acaggagcac catgggagtg cgcctcagaa cagccccggg
     1201 aaaactgagg tatcttactg ctattagcaa ctgcggcaaa ctgcacatgg tgttgcaccc
     1261 caatgcccct ccagaacttg gtctgtagcc tcttttgtca gag
//
