LOCUS       XM_039100914            1310 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T3, fast skeletal type
            (Tnnt3), transcript variant X3, mRNA.
ACCESSION   XM_039100914
VERSION     XM_039100914.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1310
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /note="troponin T3, fast skeletal type; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 17 ESTs, 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
     CDS             81..1295
                     /gene="Tnnt3"
                     /gene_synonym="Tnt"
                     /codon_start=1
                     /product="troponin T, fast skeletal muscle isoform X3"
                     /protein_id="XP_038956842.1"
                     /db_xref="GeneID:24838"
                     /db_xref="RGD:3883"
                     /translation="MSDEETEQVEEQYEEEEEAQEEAPEPEEVQEDAVAEEEREEDEE
                     EEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQALIDSHFEARKKEEEELIALK
                     ERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAEDDLKKKKALSSMG
                     ANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLSDDKLRDKAKELWDTLYQ
                     LETDKFEFGEKLKRQKYDIMTVRARVEMLAKLLPPSGAALTKPRSTARRPVPQPRAKS
                     AGAGSKRAKRCPAAETINPDSCQGPLFQLCILQPSCPGTFGNSGPTLLQCPRPLGSRN
                     KVIRLPSTVYVLCYHAQGTWRGWEVVLQDRSTMGVRLRTAPGKLRYLTAISNCGKLHM
                     VLHPNAPPELGL"
ORIGIN      
        1 acagtgcctg ctgctggtcc tgtccacaag gagcccccaa cctttctcag actcaactgc
       61 agacacaacc caccgccact atgtctgacg aggaaactga acaagttgag gaacagtacg
      121 aagaggaaga ggaggcccag gaggaagccc cggaaccaga ggaagtccaa gaagatgctg
      181 tcgccgagga ggagcgggag gaggacgagg aagaggagaa accaagaccc aaacttactg
      241 ctcctaagat cccggaagga gagaaagtag acttcgatga tatccagaag aagcgtcaga
      301 acaaggacct catggagctc caggccctca ttgacagcca ctttgaagct agaaagaaag
      361 aagaagagga gctaattgca cttaaggaaa gaattgaaaa gcgccgtgca gagagggctg
      421 agcagcaaag gattcgcgct gagaaggagc gggagcgcca gaacagactg gcggaggaga
      481 aggccagaag agaggaggaa gatgccaaga ggagagctga agatgacttg aagaagaaaa
      541 aggctctgtc ctctatgggt gccaactaca gcagctacct ggccaaggct gaccagaaga
      601 gaggcaagaa acagacagcc cgggaaatga aaaagaagat tcttgctgaa aggcgcaaac
      661 ctctgaacat tgaccatctt agtgatgata agctgaggga caaggccaag gaactctggg
      721 ataccttgta ccaactggag actgacaaat ttgagtttgg ggagaagctg aaacgtcaga
      781 aatacgatat catgactgtc cgggccagag tggagatgct ggccaagtta ttaccaccct
      841 caggagccgc attgaccaag cccagaagca cagcaagaag gccggtgcca cagccaaggg
      901 caaagtcggc gggcgctgga agtaaacgag ccaagaggtg ccctgcagca gagaccatca
      961 accctgactc ttgccagggt cccttattcc agctctgtat tctccaaccc tcatgcccag
     1021 gcacttttgg gaactcaggg cccaccctgc tgcaatgtcc tcgccctctg gggtctagaa
     1081 ataaagttat cagactcccc tctactgtct atgtgttgtg ttatcatgca caggggacct
     1141 ggagaggttg ggaggtagtg ctgcaggaca ggagcaccat gggagtgcgc ctcagaacag
     1201 ccccgggaaa actgaggtat cttactgcta ttagcaactg cggcaaactg cacatggtgt
     1261 tgcaccccaa tgcccctcca gaacttggtc tgtagcctct tttgtcagag
//
