LOCUS       XM_039090358            1125 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T2, cardiac type (Tnnt2),
            transcript variant X8, mRNA.
ACCESSION   XM_039090358
VERSION     XM_039090358.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1125
                     /gene="Tnnt2"
                     /gene_synonym="Ctt; CTTG; RATCTTG; Tnnt3"
                     /note="troponin T2, cardiac type; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 57
                     ESTs, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:24837"
                     /db_xref="RGD:3882"
     CDS             16..927
                     /gene="Tnnt2"
                     /gene_synonym="Ctt; CTTG; RATCTTG; Tnnt3"
                     /codon_start=1
                     /product="troponin T, cardiac muscle isoform X7"
                     /protein_id="XP_038946286.1"
                     /db_xref="GeneID:24837"
                     /db_xref="RGD:3882"
                     /translation="MSDAEEEVVEYEEEQEEAVEGHNDPVAPGFSSTEQEEAVEEEDG
                     EAEPDPEGEAEAEEDKAEEVGPDEEARDAEDGPVEDSKPKPRLFMPNLVPPKIPDGER
                     VDFDDIHRKRMEKDLNELQTLIEAHFENRKKEEEELISLKDRIEKRRAERAEQQRIRN
                     EREKERQNRLAEERARREEEENRRKAEDEARKKKALSNMMHFGGYIQKTERKSGKRQT
                     EREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIHNLEAEKFDLQEKFKQQKYEI
                     NVLRNRINDNQKVSKTRGKAKVTGRWK"
ORIGIN      
        1 gggagaacgg agaacatgtc tgacgccgag gaagaggtgg tggagtacga ggaggaacag
       61 gaagaagctg tggaaggcca taatgaccct gtggctcctg gcttctccag cacagagcaa
      121 gaggaggcag tggaggagga ggatggtgag gccgagcctg atcccgaggg tgaggcagag
      181 gcagaggagg acaaggcaga agaggttggt cctgatgaag aagccagaga tgctgaagat
      241 ggtccagtag aggactccaa acccaagccc aggctcttca tgcccaactt ggtgccaccc
      301 aagatccctg acggagagag agtggacttt gatgacatcc acaggaagcg catggagaag
      361 gacctgaacg agctgcagac tctgatcgag gctcacttcg agaacaggaa gaaggaggaa
      421 gaggagctca tttctctcaa agacaggatc gaaaagcgtc gggcagagcg ggctgaacag
      481 cagcgtattc gcaatgaacg agagaaggaa aggcagaacc gcctggctga agagagggcc
      541 cggcgtgagg aggaggagaa caggaggaag gctgaagatg aggcccggaa gaagaaggct
      601 ctgtccaaca tgatgcattt tggagggtac atccagaaga cagagcggaa gagtgggaag
      661 agacagacag agcgagagaa gaagaagaag attctggcag agaggaggaa ggtgctggcc
      721 atcgaccacc tgaatgaaga ccagctgaga gagaaggcca aggagctatg gcagagtatc
      781 cacaacctgg aggccgagaa gttcgacctg caggaaaagt tcaagcagca gaaatacgaa
      841 atcaacgttc tgcgaaacag gatcaacgac aaccagaaag tctccaaaac tcgtgggaag
      901 gccaaagtca ccgggcgttg gaaatagatg gaactgtgtt cgacaaagct ctgctccttg
      961 cctgtgccct tgccctgtga atcccagctc taggtcttgc caggcacccg atgcagactc
     1021 ctgtctggaa agtaggagct gacctagcta gaagccagta ctctgcctga cccctatgcc
     1081 cacaccacgt caggaataaa aagccagcac attgtgcaca tggaa
//
