LOCUS       XM_039090355            1134 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin T2, cardiac type (Tnnt2),
            transcript variant X4, mRNA.
ACCESSION   XM_039090355
VERSION     XM_039090355.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1134
                     /gene="Tnnt2"
                     /gene_synonym="Ctt; CTTG; RATCTTG; Tnnt3"
                     /note="troponin T2, cardiac type; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 55
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 2 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:24837"
                     /db_xref="RGD:3882"
     CDS             16..936
                     /gene="Tnnt2"
                     /gene_synonym="Ctt; CTTG; RATCTTG; Tnnt3"
                     /codon_start=1
                     /product="troponin T, cardiac muscle isoform X3"
                     /protein_id="XP_038946283.1"
                     /db_xref="GeneID:24837"
                     /db_xref="RGD:3882"
                     /translation="MSDAEEEVVEYEEEQEEAVEGHNDPVAPGFSSTEQEEAVEEEDG
                     EAEPDPEGEAEAEEDKAEEVGPDEEARDAEDGPVEDSKPKPRLFMPNLVPPKIPDGER
                     VDFDDIHRKRMEKDLNELQTLIEAHFENRKKEEEELISLKDRIEKRRAERAEQQRIRN
                     EREKERQNRLAEERARREEEENRRKAEDEARKKKALSNMMHFGGYIQKQAQTERKSGK
                     RQTEREKKKKILAERRKVLAIDHLNEDQLREKAKELWQSIHNLEAEKFDLQEKFKQQK
                     YEINVLRNRINDNQKVSKTRGKAKVTGRWK"
ORIGIN      
        1 gggagaacgg agaacatgtc tgacgccgag gaagaggtgg tggagtacga ggaggaacag
       61 gaagaagctg tggaaggcca taatgaccct gtggctcctg gcttctccag cacagagcaa
      121 gaggaggcag tggaggagga ggatggtgag gccgagcctg atcccgaggg tgaggcagag
      181 gcagaggagg acaaggcaga agaggttggt cctgatgaag aagccagaga tgctgaagat
      241 ggtccagtag aggactccaa acccaagccc aggctcttca tgcccaactt ggtgccaccc
      301 aagatccctg acggagagag agtggacttt gatgacatcc acaggaagcg catggagaag
      361 gacctgaacg agctgcagac tctgatcgag gctcacttcg agaacaggaa gaaggaggaa
      421 gaggagctca tttctctcaa agacaggatc gaaaagcgtc gggcagagcg ggctgaacag
      481 cagcgtattc gcaatgaacg agagaaggaa aggcagaacc gcctggctga agagagggcc
      541 cggcgtgagg aggaggagaa caggaggaag gctgaagatg aggcccggaa gaagaaggct
      601 ctgtccaaca tgatgcattt tggagggtac atccagaagc aggctcagac agagcggaag
      661 agtgggaaga gacagacaga gcgagagaag aagaagaaga ttctggcaga gaggaggaag
      721 gtgctggcca tcgaccacct gaatgaagac cagctgagag agaaggccaa ggagctatgg
      781 cagagtatcc acaacctgga ggccgagaag ttcgacctgc aggaaaagtt caagcagcag
      841 aaatacgaaa tcaacgttct gcgaaacagg atcaacgaca accagaaagt ctccaaaact
      901 cgtgggaagg ccaaagtcac cgggcgttgg aaatagatgg aactgtgttc gacaaagctc
      961 tgctccttgc ctgtgccctt gccctgtgaa tcccagctct aggtcttgcc aggcacccga
     1021 tgcagactcc tgtctggaaa gtaggagctg acctagctag aagccagtac tctgcctgac
     1081 ccctatgccc acaccacgtc aggaataaaa agccagcaca ttgtgcacat ggaa
//
