LOCUS       XM_039103599             804 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus troponin I3, cardiac type (Tnni3),
            transcript variant X1, mRNA.
ACCESSION   XM_039103599
VERSION     XM_039103599.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103599.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..804
                     /gene="Tnni3"
                     /gene_synonym="cTNI; TnI"
                     /note="troponin I3, cardiac type; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 60
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 40 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:29248"
                     /db_xref="RGD:62052"
     CDS             162..740
                     /gene="Tnni3"
                     /gene_synonym="cTNI; TnI"
                     /codon_start=1
                     /product="troponin I, cardiac muscle isoform X1"
                     /protein_id="XP_038959527.1"
                     /db_xref="GeneID:29248"
                     /db_xref="RGD:62052"
                     /translation="MGPKDVASSGLSILVEEWKKSKISASRKLQLKTLMLQIAKQEME
                     REAEERRGEKGRVLSTRCQPLVLDGLGFEELQDLCRQLHARVDKVDEERYDVEAKVTK
                     NITEIADLTQKIYDLRGKFKRPTLRRVRISADAMMQALLGTRAKESLDLRAHLKQVKK
                     EDIEKENREVGDWRKNIDALSGMEGRKKKFEG"
ORIGIN      
        1 cgatgggtgg ggcagaattt caaagaggta caggttgggg ttggtgacag ctgcctgtgg
       61 gagaaactcc tctgcctaca gcaaggcata ggcgtgagca cggtgattag cagtggatag
      121 ataggcagtg tgtagctcta gtcagagaca aagattggtg gatgggaccg aaggacgtgg
      181 cttccagtgg actcagcatt ctggttgaag aatggaaaaa gtctaagatc tccgcctcca
      241 gaaaacttca gttgaagact ctgatgctgc agattgcgaa gcaggagatg gagcgtgagg
      301 cagaggagcg acgtggagag aagggccgcg ttctgagcac gcgttgccag cccttggtgt
      361 tggatgggct gggctttgaa gagcttcagg acctatgccg gcagcttcac gctcgtgtgg
      421 acaaagtgga tgaagagaga tacgacgtgg aagcaaaagt caccaagaac atcactgaga
      481 ttgcagatct gacccagaag atctatgacc tgcgtggcaa gtttaagcgg cccactctcc
      541 gaagagtgag aatctcagca gatgccatga tgcaggcact actggggacc cgggccaagg
      601 aatccttgga cctgagggcc cacctcaagc aggtgaagaa ggaggacatt gagaaggaaa
      661 accgggaggt gggagactgg cgcaagaata tcgatgcact aagtggaatg gaaggccgaa
      721 agaaaaagtt tgagggctga gcccatggct ctcacactgt gctctgaagg gcatctctga
      781 ggaataaatt tctttaaact ggaa
//
