LOCUS       XM_039080633            6294 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tankyrase 2 (Tnks2), transcript
            variant X1, mRNA.
ACCESSION   XM_039080633
VERSION     XM_039080633.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080633.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6294
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6294
                     /gene="Tnks2"
                     /note="tankyrase 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 79 ESTs, 5 long SRA
                     reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 106
                     samples with support for all annotated introns"
                     /db_xref="GeneID:309512"
                     /db_xref="RGD:1305026"
     CDS             303..3632
                     /gene="Tnks2"
                     /codon_start=1
                     /product="poly [ADP-ribose] polymerase tankyrase-2 isoform
                     X1"
                     /protein_id="XP_038936561.1"
                     /db_xref="GeneID:309512"
                     /db_xref="RGD:1305026"
                     /translation="MSGRRCAGGGAACSSAVAEAVEPSARELFEACRNGDVERVKRLV
                     TPEKVNSRDTAGRKSTPLHFAAGFGRKDVVEYLLQNGANVQARDDGGLIPLHNACSFG
                     HAEVVNLLLQHGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGAEPTIRNTDGRTA
                     LDLADPSAKAVLTGDYKKDELLESARSGNEEKMMALLTPLNVNCHASDGRKSTPLHLA
                     AGYNRVKIVQLLLQHGADVHAKDKGDLVPLHNACSYGHYEVTELLVKHGACVNAMDLW
                     QFTPLHEAASKNRVEVCSLLLSYGADPTLLNCHNKSAIDLAPTAQLKERLSYEFKGHS
                     LLQAAREADVTRIKKHLSLEMVNFKHPQTHETALVNALDSLGQTSLHRAAHCGHLQTC
                     RLLLSYGCDPNIISLQGLTALQMGNENVQQLLQEGVSLGHSEADRQLLEAAKAGDVET
                     VKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHN
                     ACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR
                     DGNTPLDLVKDGDTDIQDLLRGDAALLDAAKKGCLARVKKLSSPDNVNCRDTQGRHST
                     PLHLAAGYNNLEVAEYLLQHGADVNAQDKGGLIPLHNAASYGHVDVAALLIKYNACVN
                     ATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTLKNQEGQTPLDLVSADDVSALLTAA
                     MPPSALPTCYKPQVLSGVRSPGATADALSSGPSSPSSLSAASSLDNLAGSFSELSAVV
                     SSSTTEGATGLERKEDSGIDFSITQFIRNLGLEHLMDIFEREQITLDVLVEMGHKELK
                     EIGISAYGHRHRLIKGVERLISGQQGLNPYLTLNNSGSGTILIDLSPDDKEFQSVEEE
                     MQSTVREHRDGGHAGGIFNRYSILKIQKVCNKKLWERYTHRRKEVSEENHNHANERML
                     FHGSPFVNAIIHKGFDERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGTGCPVHKDR
                     SCYICHRQLLFCRVTLGKSFLQFSAMKMAHSPPGHHSVTGRPSVNGLALAEYVIYRGE
                     QAYPEYLITYQIVRPEGMGDG"
ORIGIN      
        1 cccaggaccc gacagagctg gcaggagtgg tctccgcagc ttccgccgtc gcgtcgcttc
       61 ggggctcggc gagtgggttc gcgctgcctc cgctgcggtg gggcagccgg ggctcacgga
      121 gccgagcgtg gggcgcgcgg cgacgcggcc atgggactgc gccggctctg gtgacagcgg
      181 ggagcggagc ggcccgggcc ctgagcgcgt ctcctgcggg gggcctcgcc ctcctgctcg
      241 cggggccggg gctcctgctg cctttgctgg ctttgctgct ggcggcggcg gcggcccgga
      301 tcatgtctgg ccgccgctgc gccggcgggg gcgcggcctg ctcgagcgcg gtggcggagg
      361 ccgtagagcc gtccgcccgc gaactgttcg aggcttgccg caacggggac gtagagcgag
      421 tgaagaggct ggtgacgccc gagaaggtga acagccgcga cacggcgggc aggaagtcca
      481 ccccgctcca cttcgccgca ggttttggtc ggaaggatgt agttgagtat ctgcttcaga
      541 atggtgcaaa tgtgcaagcc cgtgatgacg gaggtcttat tcctcttcat aacgcatgct
      601 cttttggtca tgctgaagta gtcaatcttc ttttgcaaca tggtgcagac ccaaatgccc
      661 gggataattg gaattatact cctctccatg aagctgcaat taaaggaaaa attgatgttt
      721 gcattgtgct tttacagcat ggagctgagc caaccatccg aaatacagat ggaaggacag
      781 cattggattt agcagaccca tccgccaaag ctgttctgac cggtgactat aagaaagatg
      841 aactcttgga aagtgccagg agtggcaatg aggagaaaat gatggctctg cttacaccac
      901 tgaatgtcaa ctgccatgca agtgatggca gaaagtcaac tccattgcat ttggcagcag
      961 gatacaacag agtaaaaatt gtccaactgt tactgcaaca tggagcagat gtccatgcta
     1021 aggataaagg tgatctggta ccattacaca acgcctgctc ctacggtcat tatgaagtaa
     1081 ctgaacttct ggtcaagcat ggtgcctgtg taaatgcaat ggatttgtgg caatttactc
     1141 ctcttcatga ggcagcttct aagaacaggg ttgaagtgtg ttctcttctc ctaagttatg
     1201 gggcagatcc aaccctgctg aactgtcaca ataagagtgc tatagacctg gcccccacag
     1261 cacagctgaa ggaaagatta tcgtatgagt ttaaaggcca ttcattgctg caagctgcac
     1321 gagaagctga tgttacaaga atcaaaaaac atctttctct ggaaatggtg aatttcaaac
     1381 atcctcaaac acatgaaaca gcactggtta atgctttgga cagtcttgga cagacatcct
     1441 tacacagagc tgcacactgt ggtcatctgc agacttgccg ccttctcctg agctatgggt
     1501 gcgatccaaa catcatctcc cttcagggtc tcactgcctt gcaaatggga aatgagaacg
     1561 tgcagcagct gcttcaagag ggcgtctcac taggtcactc agaggcagac agacagttgc
     1621 tggaggctgc aaaggctggt gatgtagaaa ctgtaaagaa actctgtact gttcagagtg
     1681 tcaactgcag agacattgaa ggacggcagt caaccccact ccattttgca gctgggtaca
     1741 acagagtgtc tgtggtagag tatctcctgc agcacggagc tgacgtacat gctaaagaca
     1801 aaggaggtct tgttcctttg cacaatgcat gttcttacgg acactatgaa gttgcagaac
     1861 ttcttgtcaa gcatggagca gtagttaatg tagctgactt atggaagttc acacctctac
     1921 atgaagctgc agcaaaagga aaatatgaaa tatgcaaact tctgctccag catggtgcag
     1981 accctacaaa gaaaaataga gatggtaata ctcctctgga tctcgttaaa gatggagaca
     2041 cagatattca agatctactt agaggagatg cagccttact agatgctgcc aagaagggtt
     2101 gtttagccag agtgaagaaa ttatcttcac ctgataatgt aaattgccgt gatacccaag
     2161 gtcgacattc tacacctttg catttggcag ctggttataa taatttggaa gttgctgaat
     2221 atttgttgca acatggagct gatgtgaatg cccaggacaa aggaggactc attccattac
     2281 ataatgcagc atcatatgga catgtagacg tagcagcttt actgataaag tacaatgcgt
     2341 gtgtcaatgc cacggacaaa tgggctttca caccgttaca tgaagcagcc caaaagggac
     2401 ggacacagct ttgtgcttta ttgttggccc atggagctga tcctactctt aaaaatcaag
     2461 aaggacaaac acctttagac ttagtttcag cagatgatgt cagcgctctc ttgacagcag
     2521 ccatgccccc ctctgctctg cctacgtgct ataaacctca agtgctcagt ggcgtgagga
     2581 gccccggagc cactgcagac gccctgtctt caggtccgtc cagtccatcc agcctttctg
     2641 cagccagcag cctcgacaac ctcgctggca gtttttctga actgtctgca gtagttagct
     2701 caagtacaac ggaaggtgct accggtttgg aaagaaaaga ggattcagga atagatttta
     2761 gtataactca gttcataagg aaccttggac ttgagcattt aatggacata tttgagcgag
     2821 aacagatcac cttggatgta ctggttgaga tgggccacaa agagctgaaa gagattggaa
     2881 tcagtgcgta tggacatcga cacaggctca ttaaaggggt cgaaagactg atctctggac
     2941 aacaaggtct taatccatat ttaactctaa acaactctgg tagtggaaca attctcatag
     3001 atctgtctcc tgatgataaa gaatttcagt ctgtggaaga agagatgcaa agtactgttc
     3061 gagagcacag ggatggaggt cacgcaggcg gcatcttcaa cagatacagt attctcaaga
     3121 ttcagaaggt ttgtaacaag aaattgtggg aaagatatac acaccggaga aaagaagttt
     3181 ctgaagaaaa ccacaaccat gcaaatgaaa gaatgttatt tcatgggtct ccctttgtga
     3241 atgcgataat ccataagggc tttgatgaga ggcacgccta catagggggc atgtttggag
     3301 ctgggatcta ttttgctgag aactcttcca aaagcaatca gtatgtgtat gggattggag
     3361 gtggcactgg atgtccagtt cacaaagaca gatcgtgtta catttgtcac aggcagctgc
     3421 tcttttgtcg cgtgaccttg ggaaagtctt tcctgcagtt cagtgcaatg aaaatggcgc
     3481 actctcctcc cggccatcac tcagtcactg gccggcccag tgtgaatggc ctagctttag
     3541 ctgaatatgt tatttacaga ggagagcagg cttaccctga atatctaatt acttaccaga
     3601 ttgtaaggcc tgaaggtatg ggtgatggct gaaaccagtt ctcccaaaca tagtgtcctg
     3661 aagcgctgac ggcctcttaa gtttcactcc ttggcgggaa aagattcatc ctgactacag
     3721 gcctgtggca gaaacaaaat gtgaaagaca cctcatgttg tgacttggtg aagctttaac
     3781 agtgtacagt gtttccgagt gtttcctgtc tcagcacttt aacagatgcc attccaggtt
     3841 caactgggtc tgtctgtcct aaattataaa cagttaactt gaatctttta tacgtcatgc
     3901 attgattcta acaaaaatgg taatccctca acagaactca ttttactaat cagtactgtg
     3961 ttctttaaaa cacagcattt acactgaaga cagtttcatt tgtaaaatgt aaataagagc
     4021 ttttgtacta gcccggtatt tatttacatt gctttgtact ataaactgtt ctagagctgc
     4081 aggtttacag agtattttca tatgtgttgc tcatctgtgt ttcatctgtc gtcacctgag
     4141 tgatcgctac gttggattcc agaggctgct cagttgctaa cagagttagt ggggagacat
     4201 caacttaata agttcaattt gctgatgaaa gaatttctct atcaatagaa atctttcacg
     4261 taagaatttt ataaatactc tgggaatttt attggtgatg cctttgtgtc tacagggcac
     4321 acgttccaga gagctctggt gtgaagtgat gggggacttg tggctagaga agcttttcaa
     4381 tggccttaaa ctctgggtcc tgcttgagag aggtctgagg ttctcaacat cagagcagag
     4441 cttccaccaa gctttcagaa tgctaagccc ccacttctca acacttagtg ctctgatcat
     4501 gaattgtgag tggaagttac atttggtact ggggaaggca atcatgggta tttccaatca
     4561 gatctaatta ccttaaatct aaaatggagg ggtagggata gcaagtggga gtggatagtt
     4621 tttttacttt ctaagttttc ttgatcttat ggttatgttt atagccagtg tatttatcac
     4681 gagtaaacac aacccaaaat cataggtgtg agtgtatgtg tctgtgggta acctctggaa
     4741 agggcaagcc ctgcgcttcc tacttctgtc aaggcattcg gcccagttgg aaaaacactg
     4801 tcacaggctt aagttcagta tggcagctgt ggaagaagtc actttccatg aaaggccatt
     4861 tttactgttc tctaacgtat ctctaatgta agccttacac ttactatctt atcttgcatt
     4921 gcacagagat ctgtcttact gcacggcagt gcactcagaa atcagagatt tttacccacc
     4981 taagcttttg tgaatgagga tgtcctcttc actctcttta ccactttatc tttgttttat
     5041 atttgatttg gtctcttaat tacctggtcc tttatacaaa cttgtacata gagttgctcg
     5101 aaagttaagc ttaaccatcc tatgagttaa gagaattata tgtctggagt tgttcctaag
     5161 atgtgaattg tggtcaaggg ttaagaggtc aaatcctaac ctggaaatgc ttttatacag
     5221 ctctctgcta actacaaaca tcctaaaacc atttcttgaa tataaaagga gtatgccaaa
     5281 ttttatataa aattttcagg ttctgtaagc ttctgggttt tatagttaaa agataatgaa
     5341 attaattgat ggggtttata tttacgtact tctaaggttg gcctatgtta ctctgtgtat
     5401 ggatctggaa ttgtttttca tgtaaaatca tggtctggtt atgagctgtg ttacctccta
     5461 accccattgc ttacgtgttt ccactgtggt caatacgctg gcatggcaat gtttattggg
     5521 agctgggagt ttgggggtgt ggtttagtgc tttgcatgaa ataccttact ttataatgat
     5581 gaaattgctt tttcttttgc cttgtgattt ttttttttga agtgaaattt agtttgtgtg
     5641 tgtgtggtga tctgcccatc ggagtgtctc cttgtatcac attccatgcc tcacttaact
     5701 cttaataaac tgtttacttg ttttatgggt agcatggtaa ttcattgaga ttgcagtcaa
     5761 tcgttattgc aagagaacag agtgtagttt tgagtctgat tgtgacaggg tgcaacataa
     5821 atgtaaaatg ttgaatgttg tggccatact taactcagtt gcttcctgat gaaggtaaca
     5881 tgtgtctggg cggctacacc atctagtatg actttggtag tccttaaaat tcacccatga
     5941 aatcagtctg cttaacttat aaagagaaat atatttttgg tttttatgtc ataaaaacat
     6001 tcttgataag tttccaaatc ccagttagtc atattttttt tctctaaaag gaaaaaaaat
     6061 tagtgtattt tatatttcca tatgctaatg acctgtatgt aattagtcct tggtgttcca
     6121 caagaagagt ctcatcgaag tcgatataag ctgctttacc ctcctgcttc ttttaagatg
     6181 atactgaagt gtttgcttgc tatttgctga gcgtgcatgc ccacgtatga tgtgttccaa
     6241 ttgtttgcag gttgaggcaa gaaaacatgc aaataaactt cccaaacctc ctaa
//
