LOCUS       XM_006234485            6192 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tankyrase 1 binding protein 1
            (Tnks1bp1), transcript variant X3, mRNA.
ACCESSION   XM_006234485
VERSION     XM_006234485.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234485.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234485.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6192
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6192
                     /gene="Tnks1bp1"
                     /note="tankyrase 1 binding protein 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 21
                     ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 142 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:295707"
                     /db_xref="RGD:1312021"
     CDS             623..5740
                     /gene="Tnks1bp1"
                     /codon_start=1
                     /product="182 kDa tankyrase-1-binding protein isoform X1"
                     /protein_id="XP_006234547.1"
                     /db_xref="GeneID:295707"
                     /db_xref="RGD:1312021"
                     /translation="MKGSTLRESTAVASPLPQDMEEEQAPVGSEPGDPRAKPPVKPKP
                     RSLPSKPALPAKPSLLVPVGPRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFTSK
                     PPAEATAGGEVTQESGKEDLPPLTPPARCAALGGVRKAPAPFRPSSERFAACTVEEIL
                     AKMEQPRKEIPASPDRLWGSRLTFNHDGSSRYGPRTFGASCPREEDNKTPAKASSQER
                     TAETPAECQEECSKTPEARILTSSLALNGDLAKLASSGPPSEVSKTWVTSSADPVSEH
                     GVSTSPVLLAKVSVPASESPQLSSQQSSPCQSQLSETQSPAASEGSIYIPVTPASPSV
                     ALPEEPPCHSPSSELPAVAAPETLRPNSSPVETVSGHHSPEQPPVPLPQPLIEGAELP
                     DITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLRPPSQDQEKLGGSLAALPQDQGS
                     QSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVCRLDSPPPSPITEASEAAEAAEA
                     GNWAASGREEGVSQLGLGTPSAPESPGKPVSGVQGNDPGISLTQRDGGDSQPQSPAVL
                     SPTVEGPPGIPLLQAKENYEDQEPLAGQESPITLATREAALPVLEPVLGQQQPTPSDQ
                     PCILFVDVPDPGQALSTEEEVVTLGWAETTQPVTEAQEPGSVSPGPTGPESSSRWLDD
                     LLASPPPNSGGARRAAGAELKDLQSPSTCSEGLLGWAQKDLQSEFGVVADSHSSGFGP
                     SSWSQDASQTYSLGGRSPGGDPGLGKRDWSSKCGQGSGEGSTREWASRCSLGQEVMGI
                     GSSQDECEVPVHERAVGKPAQLGLGPQGLEADAQQWEFGKRDSQDPYSSLDKELQDQE
                     FGKRDSLGSFSIQDASLQDWEFGKRASVSTNQNTDENDQELRMKNLSGGYSSQDAEEQ
                     DREFEKRDSVLDTHGSRAIAQQDQEFGKSAWLKDYSDSSLRALSSQERGFETRSLSSG
                     FSPEEAQQQDEEFEKKTPVGEDRFREAGRDVGQLEEGASGGLLNPSTPNLQDGAARPK
                     EEGNWQDGAPSQEITRLQGRMQAESQNPTNAELEDRAKEQRGWAGDFSLGVTAQSEAA
                     FSPGRQDWSRHLCTEASEGGYQFGIIGNDRVSGAGLSPSRKSGRGHFVPPGETEAGAV
                     DWTDQLGLRNLEVSSCVSSDGSSEARENVVEKMGWSDSLSLNSGDSEEPRGMGVGEKD
                     WTSNVEARNRDLPGQGEVGGHSQARESGVGEPDWSGVEAGEFLKSRERGVGQADWTPD
                     LGLRNMAPGAGCSPGEPRELGVGQVDWGDNLGLRNLEVSCDLESGGSRGCGVGQMDWA
                     QDLGLRNLRLCGAPSEVRECGVGRVGPDLELDPKSSGSLSPGLETEDPLEARELGVGE
                     TSGPETQGEDSSSPSFETHSEDTGMDAGEAPSLGASPSRCLARSPPSGSQSLLEGIMP
                     ASGSKGATQRESAASGLRVLLEEDGVPTGAGQGEPQESSSDPLPSSRPQPDGEASQVE
                     EVDGTWSLTGGARQDEQGSAPPPRRPPRGLLPSCPSEDFSFIEDTEILDSAMYRSRAN
                     LGRKRGHRAPAIRPGGTLGLSETADMDARLFQDSTEPRASRVPSSDEEVVEEPQSRRT
                     RMSLGTKGLKVNLFPGLSPSALKAKLRSRNRSAEEGEVTESKSSQKESSVQRSKSCKV
                     PGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKI"
ORIGIN      
        1 ttccatggct cccacggcac gcccccatcc accccaggcc gcccccaccg agtccctgtc
       61 gccagtcctc agtctgttcc ttcgcgggct gcttggcatc tcgcgcagtc ttcggctgct
      121 gccgccccct ccttctccac cctcgtctgc tcctcctctt cggctagccg ctcggtgtcc
      181 gtaagctccc caaggaggtc ctccaaacag ccccttgccc tgggctgttc cgtcttcctg
      241 tttgcccccc tcttccaacg cttatccctc ctgaccatac tagccgaaca tccagcggga
      301 gacccttagg gaccaccctg cttgccctca ggcccttctg agtgcccatc cagggctggg
      361 gctacttagc tcctttccat tctttggggg cagcctcgac tcccagggct gcttggcttg
      421 cctagtccac taagggtggg gagttcctga ggtagtgcga ttctgcagct tatggccatg
      481 gcgttggtta cctggggctc ctggctgggg cctgtccacc gtagccacct cccctcttgg
      541 aggctcagag cctgttttca tctctccagc tcctaatagc ctcagagtcc atcaagcccc
      601 caggcagggt gtgccgtatg tgatgaaagg atccactctc agggaaagca cggccgtggc
      661 ttccccactg ccccaggata tggaggagga gcaggcgccc gttggctcag agccaggtga
      721 cccacgagcc aaaccccctg tcaagcccaa gccccggagc ttgcccagca agccagctct
      781 gcctgccaaa cccagccttc tggtgcctgt tgggcctcgt cctcctcggg gtcccctggc
      841 tgagctgcct tctgcccgga agatgaatat gctggcagga cctcagccct atggggtcag
      901 caagcgtcca ctcccattta catcaaagcc tccagctgag gcaactgctg ggggagaagt
      961 tacccaagag tccgggaaag aggacttgcc ccctttaaca ccgccagctc ggtgcgctgc
     1021 tctggggggt gtgcggaagg cccctgcccc cttccgtccc tcctctgagc ggtttgcagc
     1081 ctgtacagta gaagaaattt tggcgaagat ggagcagcct cggaaagaga tccctgctag
     1141 ccctgaccga ctctgggggt cccgcctcac ctttaaccac gatggaagct ctcgatatgg
     1201 ccctaggacc ttcggtgcct cctgccccag agaggaggat aataagaccc ctgccaaagc
     1261 atcatcccag gagaggacag cagagactcc cgcagagtgc caggaagagt gtagcaagac
     1321 tcctgaggcg aggatcctca cttccagcct agcactgaac ggggacctgg ctaaactggc
     1381 tagctctgga ccaccttctg aggtttccaa gacctgggtc acctcaagtg cagaccctgt
     1441 ttcagagcat ggcgtctcta ccagcccagt cctcctggct aaagtctctg tcccagcctc
     1501 cgagtctccc cagctttcaa gccaacagag ttctccctgc caatctcaac tttcagaaac
     1561 ccagagtcct gcagcttctg agggttcgat ctacatccct gtgactccag cctcccctag
     1621 tgtagccttg cctgaggagc ctccctgcca ttcccctagc tcagagctac ctgctgtggc
     1681 agccccagaa accctcagac ccaacagctc tcctgtggag acagtctcag ggcaccacag
     1741 cccagagcag cccccagtcc ccttgcctca acccttgatt gagggggctg agttgccgga
     1801 cattacacga acgttcccgt gtggcgagga ggcagcagcc aggggtcaca cagaatcccg
     1861 tccaagcagc ctggctcagc gccgtttctc agaaggcgta cttcggccac ctagccagga
     1921 ccaagagaag ctgggaggct cactggctgc tctgccccaa gatcaaggga gccagtctgc
     1981 tctagatcgt ccctttggga gtgggacaga gtctaactgg agcttgtcac agtcatttga
     2041 gtggaccttc cccacaaggc cctcaggtct gggtgtgtgt cggctggact ccccacctcc
     2101 atcccccatt acagaagcca gcgaggctgc agaggctgca gaagctggca actgggctgc
     2161 atcgggcagg gaagagggag tgtcccagct gggactggga accccatcag ctccagagag
     2221 cccaggaaag cctgtttctg gggttcaggg aaatgatcca ggcatatctc taacccagag
     2281 agatggtgga gatagtcagc ctcagtcccc agctgttcta tccccgacag ttgagggccc
     2341 accgggaata cccttacttc aggcaaagga gaactatgag gaccaggagc cattggcggg
     2401 gcaggagtcc cccattactt tggccactag ggaggcagcc ctacctgtgc tagagccagt
     2461 actgggacag cagcagccaa caccctctga ccagccctgc atcctctttg tggatgtacc
     2521 tgatcccggg caggcattgt ccactgagga ggaggtggtc accctaggct gggcagagac
     2581 tacccagccc gtgacagagg ctcaggaacc cggtagcgtg tctcctgggc ctacaggccc
     2641 tgaaagcagt tctcgatggc tggatgatct cttggcatca ccaccaccca actcaggagg
     2701 cgcacggcgg gcggctggag ccgagctaaa ggatttacag tcaccaagca cctgctctga
     2761 gggactcctt ggctgggccc agaaagacct gcagagtgag tttggggttg tagcagactc
     2821 acactccagc ggttttggtc cttccagctg gtcccaagat gcttctcaga cctacagcct
     2881 tggaggcagg agccccggag gagaccctgg tcttgggaag agagactgga gcagcaagtg
     2941 tgggcaagga tctggggagg ggagcactag ggagtgggcc agcagatgca gccttggcca
     3001 agaggtgatg ggaatcggca gcagccaaga tgagtgtgaa gtgcctgtcc atgagcgggc
     3061 agtgggaaag ccggcccagc ttgggcttgg ccctcagggc ctggaggctg atgcacaaca
     3121 atgggagttc gggaagaggg attcccagga cccttactcc agccttgaca aagagctcca
     3181 ggaccaggag ttcgggaagc gggattcctt gggttctttc agcatccagg atgcaagcct
     3241 tcaagactgg gagtttggga agagagcgtc ggtgagcacc aaccagaata cagatgaaaa
     3301 cgatcaagag ctgcggatga agaacctctc tggtggctat agtagccagg atgctgaaga
     3361 gcaggatcgg gagtttgaga agcgagattc tgtactagac acccatggca gcagggccat
     3421 agcccagcag gaccaggagt ttgggaagag tgcttggtta aaggattaca gtgacagcag
     3481 cttaagggcg ctcagctcac aggaaagagg attcgaaaca cgatctctga gctctgggtt
     3541 cagccctgaa gaagctcagc agcaggacga ggagtttgag aagaagactc cagttggcga
     3601 agacaggttt cgtgaggccg gcagggatgt gggtcaactg gaggaaggag catctggggg
     3661 cctgctgaac cccagtacac ctaatttgca agatggagct gccaggccga aagaagaggg
     3721 caactggcaa gatggtgccc ccagccagga gatcacaagg ctgcagggga gaatgcaggc
     3781 agaaagtcag aaccctacca acgcggagtt ggaagacaga gcgaaagagc agcgaggctg
     3841 ggctggggac ttcagccttg gcgttacagc ccagtcagag gcagcattta gtccagggcg
     3901 gcaagactgg agccggcact tgtgcacgga ggcctctgag ggtggctatc agtttggcat
     3961 cattggcaac gacagagtaa gtggtgctgg cctcagccct tccaggaaga gtggacgtgg
     4021 ccactttgtg cctcctggag agacagaggc cggggctgtg gactggactg accagctcgg
     4081 tctcaggaac ttggaagtgt ctagctgtgt gagttctgat ggctcaagtg aggctagaga
     4141 gaatgttgtg gaaaaaatgg gctggtcaga cagcctgagc ttgaacagtg gagattctga
     4201 ggagcccagg ggcatgggag ttggagagaa ggactggact tccaatgtgg aggcaaggaa
     4261 cagagatttg ccagggcagg gagaggtagg agggcacagc caggccagag agagtggtgt
     4321 gggggagccc gactggtcag gggtagaggc tggagagttc cttaagtcaa gagagcgtgg
     4381 agttggacag gcagattgga cacctgatct tggattgaga aacatggccc caggggcagg
     4441 ctgcagccct ggagagccca gggaacttgg ggtgggtcag gtagactggg gtgacaatct
     4501 aggccttagg aacttggagg tgtcctgtga cctagagtca ggaggctctc ggggctgtgg
     4561 agttgggcaa atggactggg cccaggactt gggactccgg aacctcaggc tctgtggagc
     4621 cccaagtgaa gttagggagt gtggggtggg gagagtgggc cctgacctag agctagaccc
     4681 caagagtagt ggcagtttgt cccctggtct ggagactgag gaccccttgg aagccaggga
     4741 gctgggggtt ggtgaaacaa gtgggccaga gacacagggt gaagacagct catcaccttc
     4801 ctttgagact cattctgaag acactggaat ggatgcagga gaagccccca gcttgggagc
     4861 cagccccagc aggtgcctgg ctcgctctcc accttctggc tcccagagcc ttctggaggg
     4921 gatcatgcca gccagcggct ctaagggagc tactcagagg gaatcagcag cttctggcct
     4981 cagggttctg ttggaggagg atggcgtccc cacaggtgct ggccaagggg agccccagga
     5041 gtcgagcagt gaccctttgc cttcctcgag gcctcagcct gatggcgaag ccagccaggt
     5101 agaagaggtg gatggcacct ggagtcttac agggggggct aggcaagatg agcaggggtc
     5161 agccccgccc ccccggcggc ctccccgagg acttctgccc agctgcccca gtgaggactt
     5221 ctcctttata gaggacactg agatccttga tagcgccatg tatcggagtc gtgccaacct
     5281 agggcgtaag cgggggcatc gggccccagc catccgacct gggggtactc tgggcctgtc
     5341 agaaacagca gacatggatg ctcggctctt ccaagattca actgagccaa gggcctcccg
     5401 ggtgccatct tcagatgagg aggtagtgga ggagcctcag agccgccgga cacggatgtc
     5461 cttaggcact aaaggactga aagtcaacct gtttcctggc ctgagcccat ccgccttgaa
     5521 ggccaagcta cgctcccgga accgctcagc tgaggaaggg gaggtgacag agagcaaatc
     5581 aagccagaaa gagtcttctg tccagcgctc taagtcctgc aaggtcccag ggttagggaa
     5641 gccccttaca ttacccccaa agccagaaaa atcctcaggg tcagaaggat catcgcccaa
     5701 ctggctgcaa gccctgaagc taaaaaagaa aaagatctga tcagaggctg aggtccttcc
     5761 catctggcag tctcaggcag tgccattcct gtggggtccc caagtgagga gacagctgga
     5821 gccccaccag ggcacagact gcagcctcct ttcccctcca cttctgcgga gtgtctggga
     5881 ggcacattta tgcactttgt atcaccgtcc caacttcttg caccccttcc gccccagctg
     5941 gaccccgtcc ccaatggtgg aaggtcttgt acccctcagt cttcccttca ccctctttgc
     6001 ttccatcttc gacctccctt gggttttctt ttgataccaa tttatatcat ttttataaaa
     6061 gcctttgatt tttgtaatgg gtggggcccc accccaaccc caccccaggt ctccctctgc
     6121 ccactaggtg ccccacagag accaatgaca ttttaccact tgaaacaatg aataaagttt
     6181 tttgggaatt gg
//
