LOCUS       NM_001419492            2412 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus tumor necrosis factor receptor superfamily,
            member 26 (Tnfrsf26), mRNA.
ACCESSION   NM_001419492 XM_006230827
VERSION     NM_001419492.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Apr 4, 2023 this sequence version replaced XM_006230827.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100250.1, SRR26643292.4785.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-124               JAXUCZ010000001.1  208252307-208252430 c
            125-206             JAXUCZ010000001.1  208243095-208243176 c
            207-335             JAXUCZ010000001.1  208242082-208242210 c
            336-447             JAXUCZ010000001.1  208241609-208241720 c
            448-515             JAXUCZ010000001.1  208239540-208239607 c
            516-638             JAXUCZ010000001.1  208236609-208236731 c
            639-677             JAXUCZ010000001.1  208236003-208236041 c
            678-2412            JAXUCZ010000001.1  208232371-208234105 c
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q42"
     gene            1..2412
                     /gene="Tnfrsf26"
                     /note="tumor necrosis factor receptor superfamily, member
                     26"
                     /db_xref="GeneID:361685"
                     /db_xref="RGD:1309693"
     exon            1..124
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..694
                     /gene="Tnfrsf26"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily
                     member 26 precursor"
                     /protein_id="NP_001406421.1"
                     /db_xref="GeneID:361685"
                     /db_xref="RGD:1309693"
                     /translation="MMGKLKTLLLPGLLLWVFKVSSTTQCESNEFKHENFCCQLCPAG
                     THLINPCHRNRGESECAPCQAQHFIDVNNREPVCSRCSKCRDDQEEVSECSSTADRKC
                     WCKQGTYCDSENCLEMCHDCSSCPEGRVIQECNATMDTVCDSKQGLSGHSPELWVILV
                     SIAAAIATVAIAAAGVIAFIRYSRHKKDRRALNDVNDTVSTSTML"
     exon            125..206
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            207..335
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            336..447
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            448..515
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            516..638
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            639..677
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
     exon            678..2412
                     /gene="Tnfrsf26"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagtgcctcc tagttggctg ggctgcaaca ggccactctt cacactgggc atctctctcc
       61 ttgtcctgcc tcttttatga tgggcaagct gaagactctg ctactgccag ggctgctcct
      121 atgggtcttc aaggtaagca gcacaaccca gtgtgagtcg aatgagttta aacacgagaa
      181 cttctgctgc caactctgcc ctgctggcac tcacctcatt aatccatgcc acaggaaccg
      241 tggtgagagt gaatgtgccc catgtcaagc tcagcacttc atagatgtga acaacaggga
      301 acctgtctgc tctcgctgct ctaagtgccg ggatgaccaa gaagaagtgt ccgagtgctc
      361 cagtactgct gatcgtaagt gctggtgtaa gcagggcacc tactgtgatt ctgaaaactg
      421 tttggagatg tgccatgatt gcagcagctg tcctgagggc agagtcatcc aggaatgcaa
      481 tgccacaatg gacactgtgt gtgactccaa gcaaggactg tcaggccact cccctgagct
      541 ttgggttatt ttggtttcca tagctgccgc tattgccacc gttgccatcg ctgccgccgg
      601 tgtcattgcc ttcattcgct actcccgtca taaaaaagat agaagagccc taaatgatgt
      661 caacgacacc gtctcaacct ccactatgct atagagtcct ggaaggtaag cagatggcat
      721 tcctgaagct cacccggatt gaaagaagtt gaaattcctg aggtgcacgg acggttaagg
      781 actcaatgaa caacgacagc tcaacactat tgtttctaaa cttgagagag acctttcgga
      841 aactgtgaca atttagctgc taaagctcgt gtttgtcttg ccctcaagac agagtcaaat
      901 gtcttttggt acaggactaa cattcctttg gagccgatac ccttccttcc gatggcacac
      961 cctgtagacc acagatctgt ggcatgcctt tctctcctgt gaagctgaca gttctctgtg
     1021 cagctagagg gcttccctcc ttgaagcctg ccatgactgg cctcagagat atgaggcttt
     1081 gtgctgtgaa cttgtaagct agaatgagtt tgggcttctg gttctcagaa tgtcttctta
     1141 gaagctgagg atgggaggac ccaaaatatt gtcctttgag cccacatcag ggtgtgactc
     1201 agacaaggtg ctttgttata cacataagtt cataacaaac ccaccctggt gggccaccct
     1261 gagcaactgt ggactttggg acaccaggca ttgggattag tgtctgtgtt tttaggttct
     1321 ctattcccca ggcatcttaa gaactagctt tagtcaaata tagtaagaag gtataggtgt
     1381 gaataagagt ttctcagaag ctatgtttac atgttaattg attaacttat tattattttt
     1441 attttgttct tgtgtttcga gatagggttt ctctgtgtag ccacggctgc cctggatctc
     1501 cctttgtaga ccaggctggc ctggaactca cagagatctg cctgttttta cctcctgagt
     1561 gctagcatta aaggcatacg ccatcgccac ccggctggga ttgaaggtgg acaccagcac
     1621 cgctcagcta acagaaccca gctttatgga aggggccttg tgaagtgtgt caatgtgaac
     1681 acgtcttaag ttttattgta cacaattgat cgagttgatt atcatcaaaa aactttctcc
     1741 caaaattgtg ctgtgctcaa atatagctaa agtatacagc tgcggtcaga cttcagaagt
     1801 ttggactagt gcaggcgaag tcgtgttgaa ctggatttcc ttttcgcctc tattggatca
     1861 ttactctgcc agccttggtg tttgcggaga tccccaaaca tcctaacaac agataaaaac
     1921 aacaacaaca accacaacaa caacactata gaattattcc gttgatagaa ctctattctc
     1981 caccagtcca agtactgtga atgctgtcat gcacttgaag ctgtagctga ttaccactgt
     2041 gccttaactc ttaactcttc ctctcatgtg ccttacttta taacgttttg ttctggtcta
     2101 taaaactcca tggagccatg aaattgggat agctaaaccc gtttctaggg ccacagtcat
     2161 tgaagtttgg gaccaggata aagtatttct aattcccttt gaaaactatt ttcatctcta
     2221 cttcaggact ggggtcagtg acaatgccca agacctgctt atgtgcttta agttttttga
     2281 aatgctaatg ctgccaaggt agtgcctctg cccaaagttg tacaatatca cagtatatgt
     2341 tttggtcatt tccttttcct tgacataatg tgatggttaa ttctttaaat taaaaaaaaa
     2401 tattttattt ga
//
