LOCUS       XM_006230917            1300 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus tumor necrosis factor receptor
            superfamily, member 22 (Tnfrsf22), transcript variant X1, mRNA.
ACCESSION   XM_006230917
VERSION     XM_006230917.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006230917.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006230917.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1300
                     /gene="Tnfrsf22"
                     /note="tumor necrosis factor receptor superfamily, member
                     22; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 13 long SRA reads, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:686008"
                     /db_xref="RGD:1586688"
     CDS             450..1064
                     /gene="Tnfrsf22"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily
                     member 23-like isoform X1"
                     /protein_id="XP_006230979.2"
                     /db_xref="GeneID:686008"
                     /db_xref="RGD:1586688"
                     /translation="MIGFCALGFLVFSLKRSRRSFLLLLLLLLLLNRFLQVMAMLQSH
                     SRQSLNSFNCALGEYRSSDLCCKLCPAGMFVQEPCTIPHTQGRCETCPPGSFSRSAND
                     LNSCIPCSTCTKEQEMVADCSATSDRVCQCQTGHYYYDPEVPEFCCPCTTCPQGIPAL
                     QECNPTNDTVCRQSASSKTDSRDRVFLPISLLLGICLMLLSAVS"
ORIGIN      
        1 gccgatgggt tctgctgcta ctgcaggaag gtgatcttgc ctatgaggct ggagctagga
       61 gagagggagg attggggctg gaactcctgg aggacaacac tgggagggag gaccctgtga
      121 gctgagcctg aatccctaga cacctgtagt ggctgcagca gaatgcccaa gcattcgtga
      181 agaggaaaag gagtctgggg caaggagctg aagcatggta gttttcctga gagctactgt
      241 gtggctggtc ttggttcagg ctggcctgag atccagaaaa cgttatctat aagcaccgat
      301 agcgatggga ggcgtgagcg gtgggctggg ccggctcagg atattagtca accggacatg
      361 gcaaggggct gagaggcgtg gccacaccag cgttctataa aaggtcccgc ggctgagcag
      421 ccggactagt gctgtggttg ctgagagcaa tgattggctt ctgcgcattg ggcttcttgg
      481 tcttctctct gaaacggagt cgccggtcct ttttgctact gctactgcta ctgctgctgc
      541 tgaatcggtt tttgcaagta atggctatgc tacaatcaca ctccagacag agcctgaact
      601 ccttcaactg cgcccttggt gaatacaggt ctagtgacct gtgctgcaag ttatgtcctg
      661 caggtatgtt tgtccaggag ccctgcacga ttcctcatac ccaaggacgg tgtgagacgt
      721 gtcccccagg atcgttctca aggagtgcta atgacctcaa ctcttgtata ccttgctcca
      781 cctgtactaa agagcaggaa atggtggccg actgctctgc caccagtgac cgggtatgtc
      841 agtgccaaac aggtcattac tactatgacc cggaagttcc agagttttgc tgcccatgta
      901 ccacgtgccc ccaaggaatc cctgcccttc aggaatgcaa ccccaccaac gacacagtgt
      961 gccgtcagtc tgcttcaagt aagacagatt ccagagaccg ggtattccta ccaatttccc
     1021 tattgctggg catttgtctg atgttgttgt ctgctgtatc ataagacgat aatggttcta
     1081 cagatgttgt cttggctatc gttttattgc atgaagaaac accatggagg caactctttt
     1141 tttttttttt ttttttttga gagagagaca gagtttctct gtgtaaccag ccctggctct
     1201 cattgtcttt gactcatttg tagaccaggc tggcctcatc ctcacagaga tccagactaa
     1261 ggcaactcta ataaaggaaa acatctaatt gggactggct
//
