LOCUS       XM_039110512            1927 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus TNF receptor superfamily member 14
            (Tnfrsf14), transcript variant X9, mRNA.
ACCESSION   XM_039110512
VERSION     XM_039110512.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1927
                     /gene="Tnfrsf14"
                     /note="TNF receptor superfamily member 14; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 37 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:366518"
                     /db_xref="RGD:1310115"
     CDS             93..794
                     /gene="Tnfrsf14"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily
                     member 14 isoform X7"
                     /protein_id="XP_038966440.1"
                     /db_xref="GeneID:366518"
                     /db_xref="RGD:1310115"
                     /translation="MGVVTLEPGRQHLQADMGLLTWQECSSWKDTVCRCISGYFCENQ
                     DGGACSTCLPHAACPPGQRVQKRGTYSHDTVCADCLTGTFSLGGTQEECLPWTKCSTF
                     QREVKHGTSSTDTTCSFQTFYIVVVIVGVAIVGAGVVVFLLRKQRQRHTSEQRPTLPG
                     LRTPGVVPGSLWSLDLQWLVVEPFLRAQLSGIVASELEAFQQEQQEDAIRFPVIEVGP
                     SVTEEEAAFNCMNSG"
ORIGIN      
        1 gctggggctc atgagagtgt gtgaggaggt ccaaagtcca tggggctcct ggcctgcagt
       61 gtcttgatta agaaaatgga acctctcccg ggatgggagt cgtcaccctg gagccgggca
      121 gacaacacct tcaggctgac atgggcctgc tgacctggca ggagtgctcc agctggaagg
      181 acactgtgtg cagatgcatc tcaggttact tctgtgagaa ccaggatggg ggcgcctgtt
      241 ccacatgctt gcctcacgcc gcctgccctc caggacagag ggtacagaag agaggtactt
      301 acagccatga cactgtatgt gctgactgcc tgacaggaac cttctcactt ggcgggactc
      361 aggaggaatg cctgccctgg accaagtgca gtacctttca acgggaagta aaacatggga
      421 ccagcagcac agacaccacc tgctccttcc agaccttcta catcgtcgtt gtgatagtgg
      481 gagttgcgat agtgggagct ggggtagttg tattcctcct ccgcaagcaa agacagcggc
      541 ataccagtga gcaacgaccc accctcccag ggctcaggac tccaggagtg gtcccagggt
      601 ctttgtggag tctggatcta caatggctag tggtagagcc cttcctcaga gcccagctgt
      661 caggcatagt ggccagtgag ctggaggctt tccagcagga gcaacaagag gacgccatca
      721 ggtttccagt catcgaggtt ggtccttctg tgaccgagga ggaggcagcc ttcaactgca
      781 tgaattcggg gtgatgagac accttggaga ccctgatggg aagtttccat atgccagagg
      841 ggcacggcag atgccctggg ctgctacggc atcacatggc aggggagatg ttgccatggc
      901 ccagggtgta gcagttgctt tgtccttctt agtgttaaat gggatcatct gcgcccatgc
      961 aaacgatcca aagtctgtat cagtgacagt taccacagac cctatgccct acttcccaaa
     1021 tcttccagac agcctgtcta aaccctaggc ctttgaccgt cctggaaatg ttaaaggctg
     1081 ctcatccaga gggctgctga gcacggcctt ctggggtcag ggtgcttgcg atgagacaag
     1141 aatatggcat tggtggattt tattttgaag tttctggggc tggaatcttg cccataccag
     1201 gcaagtgctt tattcctgag ctacattccc aagactcttt ccgtttttta tcttgaggca
     1261 aagtcacacg gaattgtctg ggccaaccat ggactccttc tgtatcttgg gcaagcctca
     1321 aacttgacgc ttctacctct gctcttcaag taacactgtg atgacctgcg tggtcctcca
     1381 gacggggcgg gtcaatgcct tctattttct ttgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     1441 gtgtgtgtgt gtgcacacgc gtacctgtta cccccttttc ccaccggacc tagccccaga
     1501 gagttttctg caggccccag agaactaagt tttactccct cagacacaag tctgctgagg
     1561 gattgattaa tcactgactc cacacctctc ctcagtgtac ctgacctgtc aaagctggtc
     1621 ttcagtactt gttccttagt agctagccat cttgagccag cccgaggctc atcaattcag
     1681 ctagatcggc ctaccactga gcgttgggca tccccttggc tctgccttct cagcgctggg
     1741 tttagggcac acagcactat gccaaacttc taaagtggat tctggggatg agcccagttt
     1801 caagaatgca ggtcctttct catgctgtgg aacagcactc ttagtgacca aaccattccc
     1861 ttggcttcag aatgaatgtc taagttattt tctacttgtc ataggaaata aatatttttg
     1921 ttacaca
//
