LOCUS       NM_001305991             823 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus TNF receptor superfamily member 13B (Tnfrsf13b),
            mRNA.
ACCESSION   NM_001305991
VERSION     NM_001305991.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 823)
  AUTHORS   Nagamachi,A., Matsui,H., Asou,H., Ozaki,Y., Aki,D., Kanai,A.,
            Takubo,K., Suda,T., Nakamura,T., Wolff,L., Honda,H. and Inaba,T.
  TITLE     Haploinsufficiency of SAMD9L, an endosome fusion facilitator,
            causes myeloid malignancies in mice mimicking human diseases with
            monosomy 7
  JOURNAL   Cancer Cell 24 (3), 305-317 (2013)
   PUBMED   24029230
REFERENCE   2  (bases 1 to 823)
  AUTHORS   Ng,L.G., Sutherland,A.P., Newton,R., Qian,F., Cachero,T.G.,
            Scott,M.L., Thompson,J.S., Wheway,J., Chtanova,T., Groom,J.,
            Sutton,I.J., Xin,C., Tangye,S.G., Kalled,S.L., Mackay,F. and
            Mackay,C.R.
  TITLE     B cell-activating factor belonging to the TNF family (BAFF)-R is
            the principal BAFF receptor facilitating BAFF costimulation of
            circulating T and B cells
  JOURNAL   J Immunol 173 (2), 807-817 (2004)
   PUBMED   15240667
REFERENCE   3  (bases 1 to 823)
  AUTHORS   O'Connor,B.P., Raman,V.S., Erickson,L.D., Cook,W.J., Weaver,L.K.,
            Ahonen,C., Lin,L.L., Mantchev,G.T., Bram,R.J. and Noelle,R.J.
  TITLE     BCMA is essential for the survival of long-lived bone marrow plasma
            cells
  JOURNAL   J Exp Med 199 (1), 91-98 (2004)
   PUBMED   14707116
REFERENCE   4  (bases 1 to 823)
  AUTHORS   von Bulow,G.U., Russell,H., Copeland,N.G., Gilbert,D.J.,
            Jenkins,N.A. and Bram,R.J.
  TITLE     Molecular cloning and functional characterization of murine
            transmembrane activator and CAML interactor (TACI) with chromosomal
            localization in human and mouse
  JOURNAL   Mamm Genome 11 (8), 628-632 (2000)
   PUBMED   10920230
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ121955.1, FQ136853.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760475
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-53                JAXUCZ010000010.1  46301336-46301388
            54-183              JAXUCZ010000010.1  46314065-46314194
            184-414             JAXUCZ010000010.1  46316039-46316269
            415-585             JAXUCZ010000010.1  46321681-46321851
            586-823             JAXUCZ010000010.1  46322223-46322460
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..823
                     /gene="Tnfrsf13b"
                     /note="TNF receptor superfamily member 13B"
                     /db_xref="GeneID:103693341"
                     /db_xref="RGD:1595998"
     exon            1..53
                     /gene="Tnfrsf13b"
                     /inference="alignment:Splign:2.1.0"
     exon            54..183
                     /gene="Tnfrsf13b"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..812
                     /gene="Tnfrsf13b"
                     /note="tumor necrosis factor receptor superfamily, member
                     13B"
                     /codon_start=1
                     /product="tumor necrosis factor receptor superfamily
                     member 13B"
                     /protein_id="NP_001292920.1"
                     /db_xref="GeneID:103693341"
                     /db_xref="RGD:1595998"
                     /translation="MALCPKKQYWDSLKRTCVSCVLTCSQRSQRTCTDFCKFINCRKE
                     QGKYYDHLLGTCVSCDSTCTQHPQQCAQFCEKRPRSQVNLQSELRRPETREVEARPDN
                     LGRYQGSEHSPGLRMNSDQLTLYCTLGVCLCAIFCCFLVALASFLRRRGEPLPSQPAG
                     QRGSQANSPHGPMTEARNEVAMPPQPVETCSFCFPERSSPTQESAPRSLGIHGFAGTA
                     APQPCMRASVSGLAVVRTPTGDERPGA"
     exon            184..414
                     /gene="Tnfrsf13b"
                     /inference="alignment:Splign:2.1.0"
     exon            415..585
                     /gene="Tnfrsf13b"
                     /inference="alignment:Splign:2.1.0"
     exon            586..823
                     /gene="Tnfrsf13b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtggtgtgg gccagggcag gcaggaggct ggcgctgttg gcacaggagc gtggattggc
       61 ggccaggagt ggctatggca ctctgcccca aaaagcagta ctgggactcc ttgaagagaa
      121 cctgtgtctc ctgcgtgtta acctgcagcc agaggagcca gcgcacctgt acagacttct
      181 gcaaattcat caactgcaga aaagagcaag gcaagtacta tgaccatctc ctggggacct
      241 gtgtcagctg tgactccacc tgcacacagc accctcagca gtgtgcacag ttctgtgaga
      301 aaaggcccag aagccaggtg aacctccagt ccgagctcag gagaccagag acccgggagg
      361 tggaagccag gccggataac ttaggaaggt accaggggtc agagcacagt ccaggattga
      421 ggatgaacag tgaccagctg actctctact gcaccctggg ggtctgcctc tgcgccatct
      481 tctgttgttt cttggtggcc ttggcctcct tcctcaggcg tagaggagag ccacttccca
      541 gccagcctgc cgggcagcgt gggtcacaag caaactctcc ccacgggccc atgacagagg
      601 ctcgcaatga ggtggccatg ccaccccagc ctgtcgaaac gtgtagcttt tgcttcccgg
      661 agcgcagttc gcccactcag gagagtgcac cacgctcact cgggattcac ggctttgcgg
      721 gcactgccgc cccgcagccc tgtatgcgcg catctgtcag cggcctggct gttgtacgca
      781 cgcccaccgg ggacgagcgt ccaggagctt gacagccaga aaa
//
