LOCUS       NM_001399312            2137 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus TNF alpha induced protein 8 like 3 (Tnfaip8l3),
            mRNA.
ACCESSION   NM_001399312 XM_006243096
VERSION     NM_001399312.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Cui,J., Hao,C., Zhang,W., Shao,J., Zhang,N., Zhang,G. and Liu,S.
  TITLE     Identical expression profiling of human and murine TIPE3 protein
            reveals links to its functions
  JOURNAL   J Histochem Cytochem 63 (3), 206-216 (2015)
   PUBMED   25479791
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Fayngerts,S.A., Wu,J., Oxley,C.L., Liu,X., Vourekas,A.,
            Cathopoulis,T., Wang,Z., Cui,J., Liu,S., Sun,H., Lemmon,M.A.,
            Zhang,L., Shi,Y. and Chen,Y.H.
  TITLE     TIPE3 is the transfer protein of lipid second messengers that
            promote cancer
  JOURNAL   Cancer Cell 26 (4), 465-478 (2014)
   PUBMED   25242044
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Jan 6, 2022 this sequence version replaced XM_006243096.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643291.23026.1,
                                           SRR26643299.35132.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               JAXUCZ010000008.1  63351539-63351687   c
            150-2137            JAXUCZ010000008.1  63309683-63311670   c
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..2137
                     /gene="Tnfaip8l3"
                     /gene_synonym="RGD1311533"
                     /note="TNF alpha induced protein 8 like 3"
                     /db_xref="GeneID:315673"
                     /db_xref="RGD:1311533"
     exon            1..149
                     /gene="Tnfaip8l3"
                     /gene_synonym="RGD1311533"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..712
                     /gene="Tnfaip8l3"
                     /gene_synonym="RGD1311533"
                     /note="tumor necrosis factor, alpha-induced protein 8-like
                     3"
                     /codon_start=1
                     /product="tumor necrosis factor alpha-induced protein
                     8-like protein 3"
                     /protein_id="NP_001386241.1"
                     /db_xref="GeneID:315673"
                     /db_xref="RGD:1311533"
                     /translation="MDSDSGEQSEGEPGTAAGPHVFSSKSLALQAQKKILSKIASKTV
                     ANMLIDDTSSEIFDELYKVTEEHTHNKKEAHKIMKDVIKVAIKIGILYRNKQFSQEEV
                     VIVEKLRKKLNQTAMTMVSFYEVEYTFDTNVLSKLLHECKDLVHELVQRHLTPRTHGR
                     INHVFNHFADVEFLSTLYSPHGNCRPNLKRICEGINKLLDDKIL"
     exon            150..2137
                     /gene="Tnfaip8l3"
                     /gene_synonym="RGD1311533"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agactctttg cagcccatac cgtgtgtgcc gcgtccacca gagtcgggag cgcccggcag
       61 gcgggcggtg gtggatgcgc gggtggcagc ccacagtatg gattcagatt ctggagagca
      121 gagcgagggc gagcccggga ctgctgcagg tcctcatgtg tttagctcca agagtctcgc
      181 ccttcaagcc cagaagaaga tcctgagcaa gatagccagc aaaactgtgg ccaacatgct
      241 gatcgatgac accagcagcg agatctttga tgagctgtac aaagtcaccg aagaacacac
      301 ccacaacaag aaggaggccc acaagatcat gaaggatgta ataaaggtgg cgatcaaaat
      361 tggtattctc taccggaaca aacagttcag tcaagaggag gttgtgattg tggagaaact
      421 ccggaagaaa ctgaaccaga ccgccatgac catggtcagc ttctacgaag tggagtatac
      481 ctttgatacg aatgtgctct ctaaacttct gcatgagtgc aaggacctgg tccatgaact
      541 ggtacagcga cacttgacgc ccagaaccca cggacgcata aaccatgtct tcaaccactt
      601 cgctgatgtg gaattccttt ccactctcta cagtccgcac ggaaactgca ggcccaatct
      661 caagaggatt tgcgaaggaa tcaataaatt gttagatgac aaaatcctct gaatagcttc
      721 tcctctcgtg gactttgctg cttcgaagtc agaatattca acctcctcgc ccagtgagaa
      781 tcaagcagca acccttgctc aagatgttct tgtgtctcct ttatcactct gatgctgatt
      841 ctaacccagg cttgggtgcg tttaccccct gagcacaggc atgagctccc aagtctaaat
      901 gaactgtgtt tgcaaagaac agacgactgg tctgagcacg aaggctgctt tgctccattc
      961 atctcgtagt ggaaggcgcc ctgcgttagg atacagaaga catgggtgtg gagagcagcc
     1021 ctgccgctgt tagggaaatc tgtgttctgg agctccatgc ctcctgacta cctcacaggg
     1081 ctgtggcaag gactgaacag gaaacctcgc actcagtttt gtgaaacaga gaccagtgac
     1141 tatatataat aaacggatgc ggcataatat ttcgtaatta gtgggtttgt tcgtggccag
     1201 ttgtcagagc atatttagtg atcacagtac cagagaggct gagctaaaag aattatgacc
     1261 aggggcgggg atagtgtgga ctgcagactg aggctcagac agaaaactct caggaaagaa
     1321 atagaagaaa aggaagaaag agttcctcgc ctcctttaag agaaacaaga gtcaaggtga
     1381 cactgctccc tttactccgc atgtgacttg aagacaccca ttcaaggctg cagcaatgac
     1441 tctcagttta ggtagagcaa tgctcttgtc gtcgtctggt tctctctggc ttctcggact
     1501 ctccagtgtc atctactcat cagccaccct atgtcacggc ctgcgttgac tcgctctctt
     1561 tgtctcctcc attcctttct tcttccacag acgtgttctg tttggatgaa taggttttaa
     1621 tttccttaat gagatggtaa attccgtctt gtagggggtg gggttgctgc ccttaaatct
     1681 tatttataac tgatctgtaa tcattttaag tattcgtcgc agtataaagc ttcagtagat
     1741 gtatatattg cattatcaaa tcagtgtaat tagcagatct atcacaaata tttatttttt
     1801 ccggcaggaa tattcagaat ccctccctct agctatttag tactacatag cacattattg
     1861 ttagctatga ctgccctact atgaaacaga atagcataat tctcctatgt taatgtgact
     1921 gtccacccct cccggtctct ttccctctcc acttctcaaa taactgatgt tcggctcttc
     1981 atttcttaga tagcaacttt tgaattattt cctgtctgtg aattgcccgg tgtttgttca
     2041 atgtctgtct catttcactt aacataaagt tttgtaattt tatccacatg gctgcaaatg
     2101 tcagaatttt ttttttacaa taaaaaaaaa aaaccca
//
