LOCUS       NM_001031651            2405 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus transmembrane and ubiquitin-like domain
            containing 2 (Tmub2), mRNA.
ACCESSION   NM_001031651
VERSION     NM_001031651.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 2405)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085794.1.
            
            On Aug 20, 2006 this sequence version replaced NM_001031651.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085794.1, BC099074.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..2405
                     /gene="Tmub2"
                     /gene_synonym="RGD1304758"
                     /note="transmembrane and ubiquitin-like domain containing
                     2"
                     /db_xref="GeneID:303567"
                     /db_xref="RGD:1304758"
     exon            1..508
                     /gene="Tmub2"
                     /gene_synonym="RGD1304758"
                     /inference="alignment:Splign:2.1.0"
     CDS             474..1433
                     /gene="Tmub2"
                     /gene_synonym="RGD1304758"
                     /codon_start=1
                     /product="transmembrane and ubiquitin-like
                     domain-containing protein 2"
                     /protein_id="NP_001026821.1"
                     /db_xref="GeneID:303567"
                     /db_xref="RGD:1304758"
                     /translation="MISRHLQNNLMSVDPVSSQAMELSDVTLIEGVGNEVMVVAGVVV
                     LTLALVLAWLSTYVADSSNSQLLGTIVSAGDTSVLHLGHVDQLVNQGTPEPTEHPHPS
                     GGSDDKAEETSDSGGDTTGEPGARGDMEPSLEHLLDIQGLPKRQAGLESSRPEASLGL
                     DDSTCLSPSPSLINVRLKFLNDTEELAVARPEDTVGTLKSKYFPGQESQMKLIYQGRL
                     LQDPARTLSSLNITNNCVIHCHRSPPGAAVSGPSTSLTPTTEQSSLGVNVGSLMVPVF
                     VVLLGVVWYFRINYRQFFTAPATVSLVGVTVFFSFLVFGMYGR"
     exon            509..1072
                     /gene="Tmub2"
                     /gene_synonym="RGD1304758"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..2377
                     /gene="Tmub2"
                     /gene_synonym="RGD1304758"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagtttgag gggtgtggat ggtttgcgac ccctaccccc ggacccccgc ttcctcacct
       61 gaccctaaac catcactgac cgggagagtc gggcttgggc actgcgtccg aaacccggaa
      121 gcccctcggc tcgggggacc catggactcc actgccaagg gaatagaacc tctcagacgc
      181 cgagccttca cctcagataa aagcacggtc ggagacgact cccgacagtg cggtcggggt
      241 cgtccactga ctgaggagag agctgaagcc ttggatcaga cagatgcagg gtcctatctg
      301 gcccctgccc acggcagttc cctgtgtcct ccgtttccat ctgtctttgc cacagtttcc
      361 ttttgtgtaa atcacggttc ctgacattaa ccttaccatc agggtttagt tgtgggagtg
      421 agacgtaatt gctatcattt gtttattgaa cagtgttaat tatttttgct tcgatgattt
      481 cacgtcatct tcaaaacaac cttatgagcg tggacccggt cagcagccaa gccatggagc
      541 tctctgatgt caccctcatt gagggtgtgg gtaacgaggt gatggtggtg gcaggtgtgg
      601 tggtgctgac tctagccttg gtcctagcct ggctttctac ctatgtagca gacagcagta
      661 acagccagct gctgggcacc atcgtgtcag caggtgacac atcggttctc cacctggggc
      721 atgtggacca gctggtaaac caaggtactc cagagccgac tgaacacccc catccatcag
      781 ggggcagtga tgataaagct gaagagacca gtgacagtgg gggagacacc actggagaac
      841 ctggagctag gggagacatg gagcccagtc ttgagcatct ccttgacatc caaggcctgc
      901 ctaagcgaca agcaggcctg gagagcagtc gcccggaagc ttcactggga ttagatgata
      961 gcacctgcct ctctcccagc cctagcctca tcaatgttcg gctcaaattc ctcaatgaca
     1021 ctgaggagct agctgtggcc aggccagagg acactgtggg tactctaaaa agcaagtact
     1081 tccctggaca agagagccag atgaaattga tctaccaggg tcggctgctg caggacccag
     1141 cacgcacgct gagttccctg aacattacca acaactgcgt gattcactgc caccgctcac
     1201 ccccaggggc agcagtttct ggcccctcaa cctccttgac cccaaccact gagcaatcca
     1261 gccttggtgt caacgtgggc agcctcatgg tgccggtgtt tgtggtgctc ttgggtgtgg
     1321 tctggtactt ccgtatcaat taccgccagt tcttcacagc acctgccact gtctccttgg
     1381 ttggagtcac agtcttcttc agcttcctag tatttgggat gtatggaaga taaggacatc
     1441 gggagacata gaaaggcatg gtcgtcctcc ttcttggcct cccccctttc ctggccagag
     1501 ctgggcccaa ggacctggga gggatgggaa aggtatggtg ggtaccctgt ccataggacc
     1561 caggaggtgt atggcctccc ttcatgtcca tagggtacag atatctctgc aagcacaact
     1621 caggtagaaa caaggacatc atcttccctc ttggaatccc aatgttcaaa ggccaagctc
     1681 agaagcctgg gcactgggcc ttccctcctg gctgtggccc tagcccagtg tcttgcatgt
     1741 ctgttcacaa acccccaggg ttgctgccag ggcagctcag catggccgta gcatacctct
     1801 atagggagtc tgaagtacct tccactcctt agagtgtgga cctttggaaa ctaaagtcac
     1861 agggatgaag actgcagtct tacctatagc atccagctgc caccacctcc ttgtgtgtgt
     1921 cccttgtagc aggaatagga tattttgctt tcttttaaag cactttgctt gcccttcttt
     1981 tctaaatagt cctgtataga gctcagtcag gaaggggatt ggggcagaag gccaagcccc
     2041 agctgctgct aacctaggcc taggactgcc agagtgctgg ccctaatcca gtgccctgcc
     2101 caattccgag gatgagttct aggtatagat tgccctcccc taggccctta gatggtcaat
     2161 atgaatgaat aaaattccat tttgtggcta tgagcctctt tgtgactgct ctgctcccac
     2221 caacatggta atgagagtgg gtaggccagg ctaccaacgg gagatgcaat ttatttacac
     2281 cagcagccat gggggcagag gggaatacac agcgtttaca aagttagcta cctgtacagg
     2341 atggattaca tatgcaaaaa taaaaatctc aagaccaaaa aaaaaaaaaa aaaaaaaaaa
     2401 aaaaa
//
