LOCUS       XM_039080377            1638 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane serine protease 12
            (Tmprss12), transcript variant X1, mRNA.
ACCESSION   XM_039080377
VERSION     XM_039080377.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080377.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1638
                     /gene="Tmprss12"
                     /note="transmembrane serine protease 12; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 Protein, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100362912"
                     /db_xref="RGD:2323781"
     CDS             63..1346
                     /gene="Tmprss12"
                     /codon_start=1
                     /product="transmembrane protease serine 12 isoform X1"
                     /protein_id="XP_038936305.1"
                     /db_xref="GeneID:100362912"
                     /db_xref="RGD:2323781"
                     /translation="MASPPFPSHAYSEVLEANLFNPGPQPRGVERPSFPCPMASRVGG
                     LPEVLCWATGPERPHQSSEGGKRWRTSRHRADLPAAAILGPAAAMGSWALSAALLCLG
                     GALAYGKLHSLTLREGSSPAQGQAAMPGPPEEEQPVTKGCGIAPLRGALEGSRIIGGM
                     QANAGAWPWQVSLQVQDGNFLVHVCGGALVRDRWVLTAAHCTKEASDPLKWRAVIGTT
                     DLTRSHSHSRSVRVSDIVIQPDFILETFVNDIALFHLKKAVRTVLQNRGYGGQRLSPW
                     KLHTCVIPEWAKTIRRSGAPGNGTTILQEAKVHFISREICNSDRSYGGVIPNTSFCAG
                     HENGTFDTCRGDSGGPLMCYLTEHKRYFVMGVTSYGHGCGRRHFPGVYSSPSFFQQWL
                     TAYLSQGNTKHLFDMDMMLGQVLMALGSIILLGAT"
ORIGIN      
        1 ctgcagccgg ctccttccaa acctgttgag catgctcgcg aggcgagggc ttcgacctga
       61 ccatggcgag ccctcccttc ccctctcacg cctactctga ggtgctggag gcaaaccttt
      121 tcaatccggg cccacagccc cgcggtgtgg agagaccttc cttcccgtgc ccaatggcgt
      181 ccagagtcgg cggccttccg gaagtcctct gctgggcgac aggcccggag cggcctcacc
      241 agtcgagcga aggcgggaag cggtggagga ccagcaggca ccgcgcggac ctccccgcag
      301 ccgccatctt ggggcctgcg gccgccatgg ggtcatgggc gctgagcgcc gcactgctgt
      361 gtttgggcgg agcccttgcg tacggcaagc tgcactcgct gaccctcagg gagggctcca
      421 gcccggcgca gggacaggct gccatgccag ggccgccgga agaggagcag ccggtcacga
      481 agggctgtgg aatagcacca ctcagaggtg cactggaagg gtctcggatt ataggaggta
      541 tgcaagccaa cgctggagcc tggccatggc aagttagcct gcaggttcaa gatggcaatt
      601 ttcttgtgca cgtatgtggt ggtgccctag tgagagacag gtgggtcctc acagctgctc
      661 actgcactaa agaggctagc gatcctctca agtggagggc ggtgatcggg accaccgacc
      721 tcacccggag ccactcccac agcaggagtg tacgcgtgtc agacatcgtc atccagccag
      781 atttcattct ggaaacgttc gtaaatgata tcgcactgtt ccatttaaag aaggccgtga
      841 ggactgtgct gcagaacaga ggctatggag gccaaaggct gagtccatgg aaactgcata
      901 catgtgtaat cccagagtgg gccaagacaa tcaggagatc aggagctcca ggcaacggca
      961 caaccatttt acaagaggcg aaagtccact tcatctctcg agagatctgt aactctgaca
     1021 gaagctacgg aggagtgatt cctaacactt ccttctgtgc aggtcatgaa aatgggacct
     1081 ttgacacgtg caggggtgac agcggtggac ccctaatgtg ctacctaaca gaacacaaaa
     1141 gatactttgt gatgggagtt accagttacg gacacggctg cggacggagg cattttcccg
     1201 gtgtctacag cagcccgtcc ttcttccagc agtggctgac ggcttacctg tcccagggaa
     1261 acaccaagca cctgtttgac atggacatga tgcttggcca ggtcctcatg gccctaggtt
     1321 ccatcatcct tctgggggca acataaggag cctccgcagg ctggggcgtc acgggcgtca
     1381 ctctgcccct gctgcgtcta cacggctccc tttagcgctt ccacaccaac attggcttgt
     1441 tttcattttt gtgtttttga atgaaaaaga ttgtgacaga tacatagttg tgaattctgg
     1501 ctccaaatca catacttcat tagaacctga ttcacaattc tgtatttgga atactttcct
     1561 agggtttgta taaaatattc agttcactat gtatgtactt tatgtgtata aaggccaata
     1621 aacagtttat aatttaac
//
