LOCUS       NM_001011997            1628 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus tropomodulin 3 (Tmod3), mRNA.
ACCESSION   NM_001011997 XM_217207
VERSION     NM_001011997.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Guo Z, Neilson LJ, Zhong H, Murray PS, Zanivan S and Zaidel-Bar R.
  TITLE     E-cadherin interactome complexity and robustness resolved by
            quantitative proteomics
  JOURNAL   Sci Signal 7 (354), rs7 (2014)
   PUBMED   25468996
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Sui Z, Nowak RB, Bacconi A, Kim NE, Liu H, Li J, Wickrema A, An XL
            and Fowler VM.
  TITLE     Tropomodulin3-null mice are embryonic lethal with anemia due to
            impaired erythroid terminal differentiation in the fetal liver
  JOURNAL   Blood 123 (5), 758-767 (2014)
   PUBMED   24159174
REFERENCE   3  (bases 1 to 1628)
  AUTHORS   Gokhin DS, Lewis RA, McKeown CR, Nowak RB, Kim NE, Littlefield RS,
            Lieber RL and Fowler VM.
  TITLE     Tropomodulin isoforms regulate thin filament pointed-end capping
            and skeletal muscle physiology
  JOURNAL   J Cell Biol 189 (1), 95-109 (2010)
   PUBMED   20368620
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079290.1.
            
            On Feb 11, 2005 this sequence version replaced XM_217207.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079290.1, SRR8487227.337467.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676808 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1628
                     /gene="Tmod3"
                     /note="tropomodulin 3"
                     /db_xref="GeneID:300838"
                     /db_xref="RGD:1311030"
     exon            1..31
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            32..202
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..1135
                     /gene="Tmod3"
                     /codon_start=1
                     /product="tropomodulin-3"
                     /protein_id="NP_001011997.1"
                     /db_xref="GeneID:300838"
                     /db_xref="RGD:1311030"
                     /translation="MALPFRKDLGDYKDLDEDELLGKLSESELKQLETVLDDLDPENA
                     LLPAGFRQKNQTSKSATGPFDRERLLSYLEKEALEYKDREDYVPYTGEKKGKIFIPKQ
                     KPVQTFTEETISLDPELEEALTSASDTELCDLAAILGMHSLIADTQFCDVLGSSNGDD
                     QEHFPNVVKGEKILPVFDEPPNPTNVEESLKRIRENDACLVEVNLNNIKNIPIPTLKD
                     FAKTLETNTHVKHFSLAATRSNDPVAAAFADMLKVNKTLKSLNMESNFITGTGVLALI
                     DALKDNETLSELKIDNQRQQLGTSVELEMAKMLEENTNILKLGYQFTQQGPRTRAANA
                     ITKNNDLVRKRRIEGDQQ"
     exon            203..359
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            360..482
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            483..572
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            573..703
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            704..811
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            812..955
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            956..1100
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1607
                     /gene="Tmod3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggactgtgc agtgggtcgg cggccagaca gctataagaa gtcgtggaag gagccggcga
       61 ctgccgacac tgagccatgg cactgccgtt ccggaaagac ttgggagact ataaggacct
      121 ggatgaggat gagctcctag gcaagctgtc ggagtcagag ctgaaacagc tcgaaactgt
      181 cctggacgat cttgaccccg agaatgccct tctgcctgca gggttccggc agaagaacca
      241 gacatcaaag tccgccacag gaccctttga cagagaacgg ctcctttcct acttagagaa
      301 ggaagcattg gagtataaag accgggaaga ctatgtaccc tacactggag agaagaaagg
      361 gaaaattttt atccccaagc agaagccagt gcagactttt acagaagaaa ctatatccct
      421 tgatccagag ttagaagaag ccttgacaag cgcttcagac acagaactgt gtgaccttgc
      481 agcaattctt gggatgcaca gcctgattgc agacacacag ttctgtgacg tgctgggaag
      541 tagtaacggt gacgaccaag aacattttcc gaatgtggtt aaaggggaaa agattcttcc
      601 agtgtttgat gagccaccaa atccaaccaa cgttgaagag agtttaaaga gaattaggga
      661 gaacgatgcc tgtcttgttg aagttaattt gaataatata aaaaatatcc caattccaac
      721 tctaaaagat tttgcgaaga ctttggaaac caacacacat gtgaagcatt tcagtcttgc
      781 agccaccagg agcaatgacc ccgtggctgc tgcttttgca gatatgctga aagtgaacaa
      841 aactttgaag agcttaaata tggagtccaa cttcatcaca ggcactgggg ttttagcact
      901 gattgatgct ttgaaagata atgagaccct atcagagctc aagattgaca atcagagaca
      961 gcagttgggc acctctgtag aattagaaat ggccaagatg ctcgaggaaa acacaaatat
     1021 ccttaaactt ggataccagt tcacgcagca gggaccccga accagggcag ccaatgctat
     1081 aacaaagaac aatgacttag tgcgcaagag gcggattgag ggagaccagc agtaagcgtg
     1141 cccagcgagg ggtaaccgct agaagactgc agatcacaga ggctcatgcg tgtggcagca
     1201 gatgtaaaca tttcctgggt ggaagggaaa agactggaaa tcttttttta actatataca
     1261 ttattttcct agcttacagt attatatttg atttgtaaaa tcagtagtag gtagtgtttt
     1321 gtatttgtat catttctact gaaaccagtt taattgaatg gtttgtaatg atttttaggt
     1381 aaaaatgcag ttgtagaaag tttcagaagt cgtgtatgta agaataattt gaatgaacat
     1441 cttggggacc aatcttttaa atcaaaaggg acgttgctaa ctcaagacta atgttgttcc
     1501 ttacacattt atggtcaggc acatggtggt ttccttttta aaatccatga attaggcaaa
     1561 cgtttactta ttccttatta gggaaataaa atgttggaat gttaaaaaaa aaaaaaaaaa
     1621 aaaaaaaa
//
