LOCUS       XM_039087801            4973 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 94 (Tmem94),
            transcript variant X2, mRNA.
ACCESSION   XM_039087801
VERSION     XM_039087801.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4973
                     /gene="Tmem94"
                     /note="transmembrane protein 94; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 12 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:102553252"
                     /db_xref="RGD:7685108"
     CDS             90..4286
                     /gene="Tmem94"
                     /codon_start=1
                     /product="transmembrane protein 94 isoform X2"
                     /protein_id="XP_038943729.1"
                     /db_xref="GeneID:102553252"
                     /db_xref="RGD:7685108"
                     /translation="MLGLCPNLPGHVEDGWAPCLWLGTSASSDSKHSCVFINGTALGL
                     VVQGEPPSALGLTTGKALSVLKEQLEAVLEKHLKERKKRLTWKEAWRSSFLHLSNRRS
                     CFHWPGASLMLLAVLLLLCCSGGQPAGSRGVELVNASALFLLLLLNLILIGRQDRLKR
                     QEVERRLRGIIDQIQDALRDGKEIKWPNSMYPDLHMPFAPSWSLHWAYRDGHLVNLPV
                     SLLVEGDIIALRPGQESFASLRGIKDDEHIVLEPGDLFPPFSPPPSPRGEVKKGPQNP
                     QQYRLFRVLETPVIDSIRWCLDTALSRPVTALDNERFTVQSVMLHYAVPVVLAGFLIT
                     NALRFMFKAPGVTSWQYTLLQLQVNGMLPILPLLFPVLWVLATACGEARVLAQMSKAS
                     PSSLLAKFSEDTLSSYTEAVSSQEMLRCIWGHFLRVIQGTSPTLSHSASLLHSLGSVT
                     VLCCVDKQGILSWPNPSPETVLFFSGKVEPPHSSHEDLTDDLSTRSFCHPEVEEEPHE
                     RDALLAGSLNNTLHLSNEQERGDWPGDGPKPSEPYSHHKGHGRSKHPSGSNVSFSRDT
                     EGGEEEPSKAQPGTEGDPYEAEDFVCDYHLEMLSLSQDQQNPSCIQFDDSNWQLHLTS
                     LKPLGLNVLLNLCNASVTERLCRFSDHLCNIALQESHSAVLPVHVPWGLCELARLIGF
                     TPGAKELFKQENHLALYRLPSAETVKETSLGRPSCVTKRRPPLSHMISLFIKDTATST
                     EQMLSHGSADVVVEACTDFWDGADIYPLSGSDRKKVLDFYQRACLSGYCSAFAYKPMN
                     CTLSSQLNGKCIELVQVPGQNSISTLCELPSTVPIKPNIRRSSWSSDGIGEVLEKEDC
                     MQALSGQIFMGMVSSQYQARLDIVRLIDGLVNACIRFVYFSLEDELRSKVFAEKMGLE
                     TGWNCHISLTPNGDMPGSEIPPSSPSHAGSLHDDLNQVSRDDAEGLLLLEEEGHSDLI
                     SFQPTDSDIPSFLEDCNRAKLPRGIHQVRPHLQNIDNVPLLVPLFTDCTPDTMCEMMK
                     IMQEYGEVTCCLGSSANLRNSCLFLQSDVSIALDPLYPSRCSWESFGYATSTTMAQAS
                     DGLSPLQLSGQLNSLPCSLTFRQEETISIIRLIEQARHATYGIRKCFLFLLQCQLTLV
                     VIQFLSCLVQLPPLLSTTDILWLSCFCYPLLSISLLGKPPHSSVMSMATGKNLQSIPK
                     KTQHYFLLCFLLKFSLTISSCLACFGFTLQSFCDSARARNLTNCSSVMLCSNDDRAPA
                     WFEDFANGLLSAQKLTAALIVLHTVFISITHVHRTKPLWRKSPLTNLWWAVTVPVVLL
                     GQVVQTVVDLQLWTHRDSPVHFGLEDVPLLTWLLGCLSLVLVVVTNEIVKLHEIRVRV
                     RYQKRQKLQFETKLGMNSPF"
ORIGIN      
        1 taacacagcc gcacgacggc aggctttctg attgggtttg atcccaagcc agtcttgccc
       61 agagctgtgt aatttggttt gtttgtgcta tgctagggct gtgccccaac ctgcctggcc
      121 atgttgaaga cggttgggca ccctgtctgt ggttagggac aagcgcctca tcagattcca
      181 aacacagctg tgtgttcatc aacgggactg cgctgggcct agtggtacag ggagagcccc
      241 cctcggccct gggcctaact accgggaagg ccctcagtgt cctgaaggag cagctggagg
      301 ctgtattgga gaaacacctc aaagaacgga agaaacggct tacatggaag gaggcatgga
      361 gaagcagctt cctgcacctc agtaaccgcc gctcctgttt ccactggcct ggggcctccc
      421 tcatgctgct ggctgtgctg ctgctcttgt gttgcagtgg gggccagcca gctgggagcc
      481 gtggagtgga actggtcaat gcctctgctc tgttcctgtt gctgcttctc aacctcatcc
      541 ttatcgggag acaagaccgg ctgaagcgcc aggaggtgga gcgcaggctt cggggcatca
      601 ttgaccaaat ccaagatgct ctcagggatg gaaaagagat caagtggccg aactccatgt
      661 acccagacct ccatatgccc tttgcaccat cctggtccct gcactgggct tacagagatg
      721 ggcacctggt gaacctgccc gttagcctgt tggtagaagg agacatcata gccctgaggc
      781 ctggccagga gtcctttgcc tccctgaggg gcatcaagga tgacgagcac attgtcttgg
      841 agccgggaga cctgttcccc cccttctctc caccaccctc gccccgggga gaagtaaaga
      901 aaggaccaca gaacccccag cagtaccggc tcttccgggt cctggagacg cctgtgattg
      961 acagtatcag atggtgcctg gacacagccc tgtcccgccc agtcactgct ctggacaatg
     1021 aaaggttcac agtacagtcg gtgatgcttc actatgccgt gccggtggtc ctggctggct
     1081 ttctcatcac caatgccctg cgcttcatgt tcaaggcacc gggggtcact tcctggcagt
     1141 acacccttct ccagctccag gtgaatggca tgttgcccat cctccctctg ctcttcccag
     1201 tcctctgggt cctggccact gcctgtggag aagctcgagt cctggcccaa atgagcaagg
     1261 cttcccccag ctccctgctg gccaagttct cagaggacac actcagcagc tatactgaag
     1321 ccgtctcttc tcaggaaatg ctgcgctgca tttggggtca ctttctaagg gtgatccagg
     1381 gcacgtcgcc aacactgagc cacagcgcca gtctgctgca tagcttgggc tctgtcacgg
     1441 tactgtgctg tgtagacaaa caggggatcc tatcatggcc aaatcccagc ccagagactg
     1501 tgctcttctt cagcgggaag gtggagcccc ctcacagcag ccatgaggac ctcacagatg
     1561 acctgtctac ccgctccttc tgccatcccg aggtggagga ggagccccat gaacgcgatg
     1621 ccctccttgc tggctccctg aacaataccc tgcacctttc caacgagcag gagcgaggcg
     1681 actggcctgg cgatggcccc aagccctccg agccctactc tcatcacaaa ggacatggcc
     1741 gtagcaaaca cccgtctggt tccaacgtga gcttcagccg ggacactgaa ggcggagagg
     1801 aagagcccag caaggcccag cccgggacag agggggatcc ctatgaggcc gaggacttcg
     1861 tgtgtgacta ccacttggag atgctgagcc tgtcccaaga ccaacagaac ccctcatgca
     1921 tccagtttga tgattccaac tggcagttac acctgacctc cctcaagccc ctgggcctca
     1981 acgtgctgct gaatctgtgt aacgccagtg tcactgagcg cctgtgccgc ttttctgacc
     2041 acctgtgcaa catcgcgctg caggagagcc acagcgctgt gctgcctgtg catgtgccct
     2101 ggggcctctg tgagctggct cgtctcatcg gcttcactcc aggggccaag gagctattca
     2161 agcaggagaa ccacctggcg ctctaccgcc tccccagtgc cgagaccgtg aaggagacgt
     2221 cactggggcg gccctcctgt gtcaccaagc ggcgccctcc actcagccac atgatcagcc
     2281 tcttcatcaa agacactgcc accagcacag agcagatgct gtcccatggc agtgccgatg
     2341 tggtcgtgga ggcctgcaca gacttctggg atggcgctga catctaccct ctttcgggtt
     2401 cggacagaaa gaaagtgctg gatttctacc agcgagcctg cctatccggt tattgctctg
     2461 cctttgccta caagcccatg aattgcacgc tgtcctctca gctcaatggc aagtgtatcg
     2521 agctggtgca agtccctggc cagaacagca tatccaccct gtgcgagctg cccagcacgg
     2581 tccccatcaa gccgaacatc cgccgtagca gctggagctc cgatgggatc ggggaggtgc
     2641 tggagaaaga agactgcatg caggccctga gcggtcagat cttcatgggc atggtgtcct
     2701 cccagtacca ggcccggctg gacatcgtgc gcctcattga tgggctggtc aacgcctgta
     2761 tccgctttgt ctacttctct ctggaggatg agctcagaag caaggtgttt gcagaaaaga
     2821 tgggcctgga gacaggctgg aactgccaca tctccctcac acccaacggt gacatgcccg
     2881 gctctgagat ccctccctcc agtcccagcc atgctggctc tctccatgat gacctgaatc
     2941 aggtgtcccg agatgatgca gaagggcttc tcctcttaga ggaggagggt cactcggacc
     3001 tcatcagctt ccagcccacc gacagtgata tccccagctt cctggaggac tgcaaccggg
     3061 ccaagctgcc ccggggcatc caccaggtgc ggccccacct acagaacatc gacaatgtcc
     3121 cactgttggt gcccctcttc accgactgta cccctgacac catgtgtgag atgatgaaga
     3181 tcatgcagga gtatggcgag gtgacctgct gcctgggcag ctcagccaac ctgcgcaata
     3241 gctgcctctt cctccagagt gacgtcagca ttgccctgga tcccttgtac ccgtcccgct
     3301 gctcctggga aagctttggc tatgctacca gcaccaccat ggcccaggcc tcggatggcc
     3361 tttctcccct gcagctctcg gggcagctca acagcctgcc ttgctccctg acgtttcgcc
     3421 aagaggaaac catcagcatc atcaggctca ttgagcaggc tcggcatgct acctatggca
     3481 tccgtaagtg cttcctcttc ttgttgcagt gccagctgac ccttgtggtc attcagttcc
     3541 tttcttgcct ggtgcagctg ccacccctcc tgagtaccac agacatctta tggctgtcct
     3601 gcttttgtta ccctctgctc agcatctctc tattggggaa accgccacac agctccgtca
     3661 tgtccatggc gacaggcaaa aaccttcagt ccattcctaa gaagacacag cactacttcc
     3721 tgctctgctt cttgctcaag ttcagcctca ccatcagctc gtgtctcgcc tgcttcggct
     3781 tcacgctaca gagcttctgt gacagcgccc gggcccgcaa cctcaccaac tgctcctcag
     3841 tcatgctgtg cagcaatgat gacagagctc cagcctggtt tgaggacttc gccaatgggc
     3901 tgctctcagc tcagaagctc acagctgccc tgattgtttt gcacactgtc tttatctcca
     3961 tcacccatgt gcatcgtacc aagcctctgt ggagaaagag ccctttgaca aacctttggt
     4021 gggcggtgac cgtgcctgtg gtgctgctcg gtcaggtggt ccagacagtg gtggacctac
     4081 agctatggac acacagggac tcgcctgtcc actttggcct agaagatgtg cccctgctaa
     4141 cgtggctcct gggctgcctg tccctggtcc ttgtggtggt caccaatgag atcgtaaaac
     4201 tacacgagat tcgggttcgt gtccgctacc agaagcgcca aaagctgcag tttgagacta
     4261 agctgggcat gaactctccc ttctgagcca tggccacggt ggccaccact gcccagcctc
     4321 ctggggccag agccagacct actgggaagt tgacatcgtg aacgtttcag ggtctttgcc
     4381 ttgtggcatc ggaggccttg ctgtgagcac tggagatgac tgtcttcctg actctggggc
     4441 ttttcatgaa gaagccaacg ggtttagcca tggtttgaca ggactgcttt ggctctcccc
     4501 tggccttgcc aggggcactc ttgaatgtat gacctcaggc ccttgttaaa gggatcctta
     4561 gtcccttcct ccatggggtc ccccttaggg gtcccctcac ttggcacctc tgctcttgca
     4621 tctacggtgg cctcggtctc tgttgggaaa gcagtagcta ccgctataca agatgctgtg
     4681 tcctcctgcc ccacagccca tctcccgggc aggggcctgg ctgcagtcgg aagaacctcc
     4741 ccttcctcta ggcttgaaga cggaaaggct ccacctcacc ctgggcccca tgtcggctga
     4801 ccataagtca tccacacagg accctgccca tgcactgtgg cccctgtcct tgttctggga
     4861 gacttttttt tacttttttt tttttttttt tttttttttt tttactggaa aatgagcctt
     4921 tgggggaatg aatgtcaact ggtttatatt aaaattgtaa attgcttaaa aaa
//
