LOCUS       XM_006238139            5176 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 8B (Tmem8b),
            transcript variant X1, mRNA.
ACCESSION   XM_006238139
VERSION     XM_006238139.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 25, 2024 this sequence was replaced by
            NM_001427449.1.
            
            On Jan 21, 2021 this sequence version replaced XM_006238139.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5176
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5176
                     /gene="Tmem8b"
                     /note="transmembrane protein 8B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     ESTs, 10 Proteins, and 99% coverage of the annotated
                     genomic feature by RNAseq alignments, including 94 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:313490"
                     /db_xref="RGD:1310012"
     CDS             209..3001
                     /gene="Tmem8b"
                     /codon_start=1
                     /product="transmembrane protein 8B isoform X1"
                     /protein_id="XP_006238201.1"
                     /db_xref="GeneID:313490"
                     /db_xref="RGD:1310012"
                     /translation="MAQPLSRPLILSQSQPWPPATPSSRFPNLSRPRPVSQRMPRSSS
                     PFQPRSLSPAWPLSPPRPLFHPLSQFPAQHLPLSHSQRLLKPLAQPQPLIPSPSHPLL
                     PSHLLPLFEPRCSVQRHPIAQSLPPSLCLPKSLPLGPRLSHTLPLSQPRLRSGLQLPP
                     ALLLLLLFSVLGPGAGGLFLTDYSTCSPRKLSPFRSFASTELFHFRVPEDTFLAVWNL
                     IIFKEQGGTFGDHCPDQSVTVYFRSGAPPVINPLHTHFPADTAVPGVFSLTLSWTLPN
                     RTSGIFNVSSPLPGDWFLAAHLPQAHGHISVKGLQDECQYLLQPQLIVRRLLDVAVLV
                     PGRPSEQTLSSHNRSALYKVFVPSFTYRVSAQLVCVGGRGASVCPLTLRLRPKAPPLH
                     NSSSVTCGGASVCQLELALPPWGHWVYVRVETPSRGPGRTVRFQLCVRLQECPQPSLS
                     RALVPGAAMNMPQSLGTQPLSLEPPSLGTPIEGSGAMAPPEHCWPVRPTLRNELDTFS
                     VHFYIFFGPSVALPPERPAVFALRLLPVLDSGGVLSLELQLNASSLRQENVTVFGCLT
                     HEVPLSLGDAAVTCSKESLAGFLLSVSVTSRVARLRIPFPQTGTWFLTLRSLCGVGPR
                     FVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHNYLYAACECKAGWRGWGCTDSA
                     DALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEAAVYTFTMFFSTFYHACDQPG
                     IVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVIKQVLYLLGAMLLSMALQLDR
                     HGLWNLLGPSLFALGILATAWTVRSVRRRHCYPPTWRRWLFYLCPGSLIAGSAVLLYA
                     FVETRDNYFYIHSIWHMLIAGSVGFLLPPRAKTDHRVPSGARARGCGYQLCINEQEEL
                     GLVGPGGATVSSICAS"
ORIGIN      
        1 gtcatgccga ggccgccgcg gggcctgctt atcgccggtt cagcgcagcc cggagtcgcc
       61 caggcctgaa ctcctcccca ggtcccggtc ccagccccga gcccgcgagg acgccagagg
      121 ccaccccccg ggggtgggga gcggagccgc gggtcagctc taagagcgtc ccgtgctggc
      181 ctggccggcc ccgcccccgc cccgggccat ggcccagccc ttgtcccggc ccctcatcct
      241 atcccaatct cagccttggc ctccagccac gccctcgtcc cgcttcccaa acctgtccag
      301 gcccaggcca gtgtcccagc gaatgcccag gtccagttcc ccattccaac cccggtccct
      361 gtccccagcc tggccgctat ctccgcctcg gcccttgttc caccccttgt cacaattccc
      421 agcccagcat ctgcccctgt cccattccca acgtttgctt aagcccctag cccagcccca
      481 gcccttgatt ccgtctccat cacacccact ccttccatca cacctcctgc ccttgtttga
      541 gccccggtgc tcagttcagc gccacccaat agctcagtct ttgcccccct ctctgtgttt
      601 gcccaagtct cttccactgg gcccccgcct atctcatact ctgcccctct cccagcctcg
      661 actcaggtct gggctccagc tgccaccagc cctattgctg ctgttgctgt tttctgtcct
      721 tggtccaggg gctggaggcc tcttcctgac tgattactcc acctgctcac cccgcaagct
      781 cagcccattc cgctcctttg ccagtactga gctcttccac ttccgagttc ctgaggacac
      841 gttcctggct gtttggaacc tcatcatctt caaggagcaa ggaggaacct ttggggacca
      901 ctgcccagac caaagtgtga ctgtgtattt ccgatctgga gcacctcccg tcatcaatcc
      961 gctgcacaca cacttcccag cagacacggc tgtgcctggg gttttctctc tgaccctcag
     1021 ctggacactg cccaacagaa cctcaggcat ctttaacgtc agcagtccct tacctgggga
     1081 ctggttcttg gctgcccacc ttccccaagc ccatggccac atctctgtca agggtctcca
     1141 ggatgaatgc cagtacctcc ttcagccaca gctgattgtt cgacgactgc tggatgtggc
     1201 tgtcttggtt cctggccgtc cctcagagca aaccctctcc tctcataatc gttcagcctt
     1261 gtacaaggtc tttgtaccca gcttcactta cagggtttca gcccagctgg tgtgtgtagg
     1321 ggggcgaggg gcgtctgtct gtcccctgac actgcgccta cgtcccaagg ccccacccct
     1381 acacaactca agctctgtga cctgtggagg ggcctccgta tgccagctgg agctggccct
     1441 gcccccctgg ggccactggg tctatgtacg cgtggagaca ccatcccgtg gtcctggcag
     1501 gactgtccgc ttccagctgt gtgtgcgctt acaagagtgt ccacaaccca gcctgtcccg
     1561 tgccttggtc cctggggctg ccatgaacat gccccagtca ctgggcaccc agccactgtc
     1621 cctggagcca ccgtccctgg ggacgcctat agaagggtct ggagccatgg caccacctga
     1681 gcactgctgg ccagtgcgtc cgactctgcg caatgagctg gacaccttct ctgtccactt
     1741 ctacatcttt ttcggtccca gtgtggctct tccaccggag cgcccagccg tgtttgccct
     1801 gaggctgttg ccagttctag acagtggggg cgtccttagt ctggagctcc agctcaatgc
     1861 gagctctctg cgccaggaaa atgtaacagt attcggatgc ctgactcatg aggtgccctt
     1921 gagcctgggg gatgccgctg tgacctgttc caaagagtcc ctggcaggtt tccttctctc
     1981 ggtcagtgtc acctccagag tggccagact gcgaatccca ttcccacaga cggggacctg
     2041 gttcctgacc ctccgttctc tgtgtggggt gggacctcgg ttcgtgcggt gccgcaacgc
     2101 aacggctgaa gtgcgcctgc gcaccttctt gtccccgtgt gtggatgact gtgggcccta
     2161 tggccagtgc aagctgttgc gcacccacaa ctacctgtac gccgcctgcg agtgcaaggc
     2221 tgggtggcgg ggctggggtt gcacagacag tgccgacgcg ctcacctatg ggttccagct
     2281 gctgtccaca ctcctcctct gcctgagcaa cctcatgttt ttgccacccg tggtcctggc
     2341 cattcggagc cgatatgtgc tggaagctgc tgtctatacc ttcaccatgt tcttctccac
     2401 gttctaccac gcctgtgacc agccaggcat tgtggtcttc tgtatcatgg actacgatgt
     2461 gcttcagttc tgtgacttcc tgggctccct aatgtccgtg tgggtcactg tcattgccat
     2521 ggctcgtctg cagcctgtga tcaagcaggt gctgtatttg ctcggggcta tgttgctgtc
     2581 catggctctg cagcttgacc gccatggact ttggaacctg cttggaccca gtctcttcgc
     2641 cctcgggatc ttggccacag cttggacagt tcgcagcgtc cggcgccggc actgttaccc
     2701 gccgacatgg cgccgctggc tcttctacct gtgcccaggc agcctgattg ccggcagtgc
     2761 cgtcctgctg tacgccttcg tggagactcg ggacaactac ttctacattc acagcatctg
     2821 gcacatgctc attgctggca gtgtgggctt cctgttgcct cctcgtgcca agactgacca
     2881 ccgggtccct tccggagccc gggccagggg ctgtggttac cagctgtgca tcaatgaaca
     2941 ggaggagctg ggccttgtgg gcccaggagg ggccactgtc agcagcatct gtgccagctg
     3001 agggggcttt gggccaagct ctgaggggta tgaacctgcc tagggttcct ccgggggctc
     3061 cggaacccac ctaggtacaa gggacaagct gtgtttctta acaacacaca gtctttctca
     3121 aggatgactg ttttcaggga tcaggaggct tttctaagat atggagaact ccttaagagc
     3181 ccagagtcct cctgtgttta tggagtctta aggatgagct atgcaggaca ctgggccctt
     3241 gaggaccagg gagtccctag gggtgtggag ccctccccag gcatagggag ccttcctaca
     3301 gacgagagaa cttcccaagg agacaaactt tcatccacaa tgtgtcatca gtacacgggg
     3361 aagcaggagt ccatcctgga ggaaagtcac cagattttcc cagtggctca caggattggc
     3421 cttgggctgc tgggctgggc tctaagagag atggggctgg cactgccagg cagctggtgc
     3481 ccgatgtggt acaggtggag tctgggacgt ctccaatgaa gtctgtgctg agtctgtgct
     3541 gccgtttttt cccttgtggg gtcagggtgt ggggaagtgg ggaaggggga cactgaggaa
     3601 atcctgagaa tgacagggac cttcctggag aagctgctgg agccactcac tgccagtggc
     3661 ttccgccctg tggcttgtac actggcttcc ctctcatgtg tccctccctg acgcccgttt
     3721 cccaattgct atggatccta gtctggagtc atgaagaggg tgtgtgtatc cgtgtgtgtg
     3781 agcgtgctgg ctgtgtatac acagagatga attagtgaga cagacttccc catgccgcct
     3841 acacacacac agggaagcta aggttccagg gaattagagt aacaggtacg aattttagat
     3901 gtagaaggca tcacaagaat ggaactacta ttttaagctt ccattttttt cttgcatgcc
     3961 agaaataatc ttgtataaat tgagatttca tttctttgtg tgtgtgtgtg tgtgtgtgtg
     4021 tgtgtgtgtg tgtgtgtgtg agagagagag agagagagag agagagagag agagagagag
     4081 agagagagag aatctctatg tatatagttt gttttggctt aaatctcgtg atcctctggg
     4141 tcctggaatc acagacatgg acaccatacc tggcagctgg acttgttctt ttctcatggg
     4201 ttcatagctg agttttgagg atgttgtctt acgctgagat actagaacat tctttctggt
     4261 ccccagtatc catactttac ccacttccga gagttcagtc cactcacctg gttcccagtc
     4321 agcagtcaga caggctacta aacgctgaga aatttcttgt tctgtctgca tagccccgag
     4381 ttcctgtacc ccagttctgt gccacatgag aagttcttga ttggctactc agacacagcg
     4441 tgacgtcggt tctcctccgg ggtcctgttc tggggtttac ttgataaggc aaatgatggg
     4501 tggttttctc ttttgagctc cgtagatgga gccaggggct ctgctcctgt ctctctaggc
     4561 aacctgggac agtgctcaca cttcttccct cccctcaccc ctcccacttg tcagtctgga
     4621 gcaggagcca gtttcacatt tctaccaaat cttctctctg tgccttaagt ccttcctatt
     4681 ctcttcacag cccaggcctt tgaagctcaa agcctagaca ataccacttt attctttatt
     4741 ctctgtaata aaatctcttc cctgaggcac cgagtacaga ataaagtagc tggctgagtg
     4801 gctaggagtg ctggtgtgtg gccgggtgtc cgttcctgga ttaaaagtgc tattcttggg
     4861 ccaggtatgg tggtgcatgc cttcaacccc agcattctgg gggcaggagc tgtgaggtag
     4921 cgtgagtgag agccagccga ggttacatag atcctctctt aaagaaaagt aaaataaaat
     4981 ggctggacaa atggctcagc agttgagcat gcattgctgt tccagaggac ctgagttcaa
     5041 atccctgtac ccacagctcg aggggacaca cactctgggc tccatgggca ctctccacac
     5101 aagtgacata cactcacatg gacacaaaca cacatacaca tggttaaaaa taataaattt
     5161 tttaaaaaag aaaaaa
//
