LOCUS       NM_001128155            1567 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 88 (Tmem88), mRNA.
ACCESSION   NM_001128155 XM_001079371
VERSION     NM_001128155.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Zhang,X., Yu,X., Jiang,G., Miao,Y., Wang,L., Zhang,Y., Liu,Y.,
            Fan,C., Lin,X., Dong,Q., Han,Q., Zhao,H., Han,Y., Han,X., Rong,X.,
            Ding,S., Wang,E. and Wang,E.
  TITLE     Cytosolic TMEM88 promotes invasion and metastasis in lung cancer
            cells by binding DVLS
  JOURNAL   Cancer Res 75 (21), 4527-4537 (2015)
   PUBMED   26359454
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Lee,H.J., Finkelstein,D., Li,X., Wu,D., Shi,D.L. and Zheng,J.J.
  TITLE     Identification of transmembrane protein 88 (TMEM88) as a
            dishevelled-binding protein
  JOURNAL   J Biol Chem 285 (53), 41549-41556 (2010)
   PUBMED   21044957
REFERENCE   3  (bases 1 to 1567)
  AUTHORS   Liska,F., Gosele,C., Rivkin,E., Tres,L., Cardoso,M.C., Domaing,P.,
            Krejci,E., Snajdr,P., Lee-Kirsch,M.A., de Rooij,D.G., Kren,V.,
            Krenova,D., Kierszenbaum,A.L. and Hubner,N.
  TITLE     Rat hd mutation reveals an essential role of centrobin in spermatid
            head shaping and assembly of the head-tail coupling apparatus
  JOURNAL   Biol Reprod 81 (6), 1196-1205 (2009)
   PUBMED   19710508
  REMARK    Erratum:[Biol Reprod. 2010 Apr;82(4):804. Rooij, Dirk G de
            [corrected to de Rooij, Dirk G]]
REFERENCE   4  (bases 1 to 1567)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On Jun 8, 2008 this sequence version replaced XM_001079371.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV216355.1, EF532356.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676789, SAMN16676806
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1567
                     /gene="Tmem88"
                     /gene_synonym="RGD1561781"
                     /note="transmembrane protein 88"
                     /db_xref="GeneID:497936"
                     /db_xref="RGD:1561781"
     exon            1..220
                     /gene="Tmem88"
                     /gene_synonym="RGD1561781"
                     /inference="alignment:Splign:2.1.0"
     CDS             11..490
                     /gene="Tmem88"
                     /gene_synonym="RGD1561781"
                     /codon_start=1
                     /product="transmembrane protein 88"
                     /protein_id="NP_001121627.1"
                     /db_xref="GeneID:497936"
                     /db_xref="RGD:1561781"
                     /translation="MAEVPAAQRPGLAGAPEPRDPLDCWACAVLVTAQNLLVAVFNLL
                     LLALVLGTILLPAVTMLGFGFLCHSQFLRSQAPPCTAHLRDPGFTTLLVIGFLLLVPL
                     LVLALATYRRLCLRLRLADCLVPYSRALYRRRRIPQPKQIPVSSSPRSVPTPGKVWV"
     exon            221..1567
                     /gene="Tmem88"
                     /gene_synonym="RGD1561781"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caactaggcc atggcggagg tccccgcagc ccagcgtccc ggtctcgctg gcgccccaga
       61 gccccgggat cccctagatt gctgggcctg tgcagtgcta gtaacggctc agaatctgct
      121 ggtggctgtt ttcaatctcc tcttgttggc gctggtgctg gggaccatct tgctacctgc
      181 tgtcaccatg ttaggcttcg gctttctctg ccactcccag tttctgcgtt ctcaggcacc
      241 cccttgcacc gcgcatctgc gggacccagg cttcaccacc ctgttggtca ttggattcct
      301 actgctcgta cctttgcttg tgcttgccct ggctacctac cgccgcctct gcctgcgcct
      361 ccgcctggcc gactgccttg tgccctacag ccgagccctc tacaggcgcc ggcgcatccc
      421 acagccgaag caaatcccag tctcatcaag tccccggtct gttcccacac cgggaaaggt
      481 ctgggtctga ggtgcttaga gtcaagaacc ctgtccattg ccctcctggt ctctcaagga
      541 cttgaagcaa gcccagggtg tactgcccaa ccctgctcct caccgctgcc tcagtcaaat
      601 actagcatct ctttgatgga acaacagaat gtggacacaa tgctggcgaa aatttccatg
      661 tctcaaagac tcacatttgg ttcctgaatg tttgggctgg accctgcaca tcttcccctt
      721 ccctagtgta aataggagag ctggaatgtg tgccttcctt ctggtgcagc tcctccagaa
      781 tttacaggac tgagggacag gacttgagaa gaaaccacca caaataataa aaaatttata
      841 aaatgaatgc gctctgtgaa tataggggtg gcacatatcc aattgcccct gcccagggct
      901 caggagtagg aaacagatcc tcaagactac aaatgagcaa accagagaac atcattcagc
      961 atcctgcctt ttccttatcg cattagtccg ttcttcctgg tcagacccca gagttcactg
     1021 gccctgaccc caaagtcact tccccattta tagtgcagag agggccttgt ttcggctgcc
     1081 tactcaactc cccttgggga cccgagcccg ttctctgacc ccagcttaaa ggaactaagt
     1141 gttgccaggc cggggtgtga aacaatgggt cttccggagc aggatgactc cccttcccgc
     1201 tacaatctga agcagcagcg tgggagggaa gatggagggg cccaccctag gccctgttgc
     1261 cttaagctca taacttgagg gagggtttgg tattcctgag cattaggttg aaggggcagg
     1321 ttgaggaagc tcctgggctc agatgaacct ctaagggtag ggtgctaacc ctaccctgac
     1381 attggaccta cacacagaca cgggccactt tggtcatagg gtttaatggt ctcaaagaga
     1441 agtgcaatcg tggtcagaga tacgggcccc ccgacagact ctccctttgg acttcaatag
     1501 aaacgatgtg gtgtcctggt accatggcga gacccagcac acggggttcc cccgcagaaa
     1561 atgaatc
//
