LOCUS       XM_039106521            2073 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 87A (Tmem87a),
            transcript variant X1, mRNA.
ACCESSION   XM_039106521
VERSION     XM_039106521.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2073
                     /gene="Tmem87a"
                     /note="transmembrane protein 87A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 205 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:366170"
                     /db_xref="RGD:1309417"
     CDS             39..1721
                     /gene="Tmem87a"
                     /codon_start=1
                     /product="transmembrane protein 87A isoform X1"
                     /protein_id="XP_038962449.1"
                     /db_xref="GeneID:366170"
                     /db_xref="RGD:1309417"
                     /translation="MAVKMAVAAWLQVSPVIFLLLGAQPFPLSFLGAGPAPVFAADRS
                     KWHVPMPSGKSYFNFGKILFRNTTIVLKFDGEPCDQSLNITWFLKSADCYNEVYNFKA
                     DEVETYLENLKEKKGLSGRYQTSSKVFQNCSELYKAQSFSGDLMHRLPLLGEKQEAKE
                     NATNLTFTGDKIAMHEPLQTWQDAPYIFIVHVGISSSKESPKENALSNLFTMTVEVKG
                     PYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFE
                     KAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTL
                     HKVVVAGALYLLFSGMEGVLRVTGYFSYSLALIVSLALSAIDACIILWIFISLTQTMK
                     LLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIW
                     RLLFSMILFVIMILWRPSANNQRFAFSPLSEEDEEDEQKEPMLKESFEGMKMRSTKQE
                     PNGNSKANKTQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME"
ORIGIN      
        1 tagccggaag aaggctcaat gcttttggta ggcgctctat ggccgtgaag atggcggtgg
       61 ctgcgtggct tcaggtgtct cctgttattt ttcttctttt aggggcgcag ccgttcccat
      121 tgtcgtttct tggtgcaggt ccagcacccg tgtttgctgc ggatagatcc aagtggcacg
      181 taccgatgcc gtcggggaaa agttatttta attttggaaa gattctcttc agaaatacta
      241 ccatcgtact gaaatttgat ggtgagcctt gtgaccagtc tttgaatata acctggtttc
      301 tgaaaagtgc tgattgctac aatgaagtct acaatttcaa ggcagatgaa gtagagacat
      361 acttggaaaa tctcaaggaa aaaaaaggct tgtctgggag ataccaaaca tcatcaaaag
      421 tatttcagaa ctgtagtgaa ctatataaag cacagagctt ttctggggat cttatgcatc
      481 gacttcctct tttaggagaa aaacaggagg ctaaggagaa tgcaacaaat cttaccttta
      541 ctggagacaa aattgcaatg catgaaccat tgcagacttg gcaagatgca ccatacattt
      601 ttattgtaca tgttggcatc tcgtcctcaa aggaatcacc aaaagaaaat gcactaagta
      661 atctttttac catgactgtt gaagtaaagg gtccctatga atacctcact cttgaagact
      721 acccactgat gatttttttc atggtgatgt gtattgtgta cgtgctattt ggtgttctct
      781 ggctggcatg gtcggcctgc tactggagag atctcctgag aatccagttt tggattggtg
      841 ctgtcatctt tcttggaatg tttgagaaag ctgtgtttta tgcagaattt cagaatatcc
      901 gatacaaagg agaatctgtc cagaatgcct tggtccttgc agagctgctc tcagcagtaa
      961 aacgctcatt ggctcgaacc ctggtcatca tagtcagtct gggatatggc atagtcaagc
     1021 ctcgccttgg agtcactctt cacaaggttg tggtggcagg ggcactttat cttttattct
     1081 ctggcatgga aggagtcctc agagttacag ggtatttttc ttactcattg gctctgatag
     1141 taagcctggc cctctctgca attgatgcct gtattatttt atggatattc attagcttga
     1201 ctcaaaccat gaagctatta aaacttcgga ggaacatcgt aaagctctct ctgtaccgac
     1261 atttcaccaa tacgcttatc ttggcagtgg cagcatctat agtgttcatc atctggacga
     1321 ccatgaaatt cagaatagtg acttgccagt cggactggcg ggagctgtgg gtagatgatg
     1381 ccatttggag attgctgttt tccatgatcc tctttgtcat catgattctc tggcgaccat
     1441 cagcaaataa ccagagattt gccttctcac cattgtcaga ggaagatgaa gaggatgagc
     1501 agaaggaacc aatgttgaag gaaagctttg aaggaatgaa aatgagaagt accaagcagg
     1561 aaccaaatgg gaatagtaaa gcaaacaaaa cacaggaaga tgatttgaag tgggtagaag
     1621 aaaatgttcc ttcttccgtg actgatgtag cacttccggc cttgctggac tcagatgagg
     1681 aacgaatgat cacacacttt gaaaggtcga agatggagta aacagtagga agctgccatt
     1741 gaagatggcc gtaccgggag gagacggctc gagtgtcagt cctctgcact gcactgctcc
     1801 atgggaatta aaggaggcaa tggcatcttg ctctgttcct tgatctttgt gcttgggagc
     1861 tggggagagg tgtcagccaa gaagaacagc ttactgaaaa cacattcata ggatgagaaa
     1921 aatctacagg cttctttaca tcattggcac ccttccctcc caaaccccat catggctgtt
     1981 tttgcaagct atatgttgtc cctgaacttt tattctgttg tttaatctgt cagactagga
     2041 agtttaaagt ttataaaagg actgtgtcat tta
//
