LOCUS       NM_001109604            1123 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 86B (Tmem86b), mRNA.
ACCESSION   NM_001109604 XM_001064677 XM_001064738
VERSION     NM_001109604.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1123)
  AUTHORS   Wu,L.C., Pfeiffer,D.R., Calhoon,E.A., Madiai,F., Marcucci,G.,
            Liu,S. and Jurkowitz,M.S.
  TITLE     Purification, identification, and cloning of lysoplasmalogenase,
            the enzyme that catalyzes hydrolysis of the vinyl ether bond of
            lysoplasmalogen
  JOURNAL   J Biol Chem 286 (28), 24916-24930 (2011)
   PUBMED   21515882
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474075.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001064677.1, XM_001064738.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ210876.1, FQ219460.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1123
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q12"
     gene            1..1123
                     /gene="Tmem86b"
                     /note="transmembrane protein 86B"
                     /db_xref="GeneID:690610"
                     /db_xref="RGD:1593455"
     exon            1..144
                     /gene="Tmem86b"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..774
                     /gene="Tmem86b"
                     /EC_number="3.3.2.2"
                     /note="lysoplasmalogenase"
                     /codon_start=1
                     /product="lysoplasmalogenase TMEM86B"
                     /protein_id="NP_001103074.1"
                     /db_xref="GeneID:690610"
                     /db_xref="RGD:1593455"
                     /translation="MDARKEGLSLEILFSDQYPQVRRWLAPFIVACSLYFLLWIPEDQ
                     PSWVSALVKCQPILCLVLFLWAVAPGGSYTWLLQGALTCSAVGDACLIWPEAFFYGMA
                     VFSVAHLLYLWAFGLSPLQPGLLLCTTLASLTYYSFLLLHLEPNMVLPVAAYGLILNT
                     MLWRGLVLGRSAGWGAVLFIFSDGVLAWDTFVYTLPFARLVTMSTYYAAQLLLTLSAL
                     RSPGLKTH"
     exon            145..391
                     /gene="Tmem86b"
                     /inference="alignment:Splign:2.1.0"
     exon            392..1123
                     /gene="Tmem86b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagagtcca caggacactt gggttaatgt gtaaccacag ggcttcccct ctgccctctg
       61 aagccactgg ttcctaaaga gaagtcactc aacatggatg ctagaaaaga gggactgtcc
      121 ctggagatac tcttttcaga ccaatatcca caggtccgca ggtggctggc ccccttcatc
      181 gttgcctgct ccctctactt cctcctctgg attcctgagg accagccatc ttgggtcagt
      241 gccctggtca agtgccagcc cattctctgc ctggttttgt tcctgtgggc tgtggctcct
      301 ggtgggagct acacctggct cctgcaggga gctcttacat gttctgctgt tggagatgcc
      361 tgcctcatct ggcctgaagc tttcttttat ggcatggcag tcttctctgt tgcccactta
      421 ctctacctct gggcttttgg cctgtctcca ctgcagcctg gattgctgct gtgcaccacc
      481 ttggcctctc tgacatacta cagcttcctc ctgctacacc ttgagccgaa catggtcttg
      541 ccagtggcag cctatgggct gatcttgaac accatgctgt ggcgtggcct tgtcttgggt
      601 aggagtgctg gctggggtgc cgtgctcttt atattctcag atggtgtgct ggcctgggac
      661 acttttgtct acactttacc ttttgcccgc ctagtgacca tgagcaccta ctatgcagcc
      721 cagctcctcc tcaccctgtc agccctcagg agcccagggc tcaaaaccca ctaatgcagg
      781 acccagacag cctggtactc cctcccataa gaaccttggc tttccacact ggcccagcct
      841 ggcaagtgaa tgcttctgat catatgtgaa cagatatgtg gccgaccctc ttaaacatct
      901 gcctgcatac tgttgtcagg atttcaaatc taccactgat ttcaagctgc cttccctggc
      961 ttctgacttt ggattccagg acgcccaacc caagccatat tctgttttcc cctccccatg
     1021 cccacttcct tttcccagtc agtttttcct atccacctgc cccttcacac tgctcccagg
     1081 tctggttctg gctgtctaag taaaaccaat gttggaacat cag
//
