LOCUS       XM_008764305            2369 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 82 (Tmem82),
            transcript variant X1, mRNA.
ACCESSION   XM_008764305
VERSION     XM_008764305.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008764305.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008764305.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2369
                     /gene="Tmem82"
                     /note="transmembrane protein 82; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 8
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 8 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:298605"
                     /db_xref="RGD:1566169"
     CDS             565..1824
                     /gene="Tmem82"
                     /codon_start=1
                     /product="transmembrane protein 82 isoform X1"
                     /protein_id="XP_008762527.1"
                     /db_xref="GeneID:298605"
                     /db_xref="RGD:1566169"
                     /translation="MFSLPSLSSWLPNFPSFEWGSSLFDSLLQGLIGALGVSVLNNLL
                     KVYFFVACVNDPQRQPQMQRLRAQWASLEIVHLAGLALFLTVIRARVAALVVLEFSLR
                     AVSTLLSLGKGSRDKERLQLFLVCQFSLGCGLSCGLSFLQEGAPHRSLNLLLSLGLAA
                     LLSLGARRLNRHTCNLYELHSSQRYCGVCLGLLASQHGLPRFLGRALAVAFAVSDLAA
                     VALINKDFLNTSEAVRFWTPLTICYTLLVIYMQGESPGAEVPSIGHTSQPPSPGTGLY
                     CRLLRCHIGALKTRHLGLSSGLEEQQHRFSLQGQVQTVLVRMAGLFVLLMTVGLWLDL
                     LGIFVSLLGELWCLAGIRVLIDLCQIQVGTFRDPQPPTPSPRFPATPRDLILIRVGRA
                     RDPVVIKEWGAGCQGPLRLASWEGPRG"
ORIGIN      
        1 gcacgacccc gagacagcgc tcaacctgag tctttttttt tttttttttt ttcggagctg
       61 gggatcaacc tgagtcttaa ggggattcca aacccttctt tccctgtgcc ctacagaagc
      121 tgaactactg attttcaaaa gcctggagag acagagccca aagagtctta gcattgtggg
      181 gagccctcct gctttgggaa cttgagagag ccaactccca cttcaggttg agtgggagcc
      241 acacctgaga ggggaaggcc aggtgagctg gcagaggagg gacttccgga aagcaagatg
      301 gccttgaagt ctagcgggga cagaccagaa ccagaaccag gcagacctaa atggaaagcc
      361 accagcagct gccggttgac agcgaggctg aatcctgcag cctggaagat ctgaggcggc
      421 tggctctcct gccccgcccc caggcctttg accctttcct agtccctccc ctgtcctctt
      481 gagacacctt tgaccggtga tatcattggg tctgtcccag cgcagacccg gcctgaggct
      541 gaggctggat tcctggaggc tgccatgttt tccctgcctt ccctctcctc ctggctcccc
      601 aacttccctt cctttgagtg gggttccagt ctcttcgaca gcctcctgca aggcctgatc
      661 ggggcccttg gagtctcggt tctcaacaat ctcctgaaag tttacttctt cgtggcctgt
      721 gtcaatgacc cccagcggca gccccaaatg cagcggctgc gagcgcaatg ggcctccttg
      781 gagattgtgc atctggccgg tctggctctg ttcctgaccg tgataagggc cagggtagcc
      841 gccctcgtgg tcttggagtt ctccctccgg gctgtgtcca cattgctgtc cctgggcaag
      901 ggctccaggg acaaggagcg gctccagctc ttcctggtgt gtcagttctc cctgggctgt
      961 gggctaagct gtggcctgag cttcctacag gaaggtgccc cacaccgctc cctaaaccta
     1021 ctgctgagcc tagggctggc cgcactcctc agcctgggcg cccggcgctt aaaccgtcac
     1081 acctgcaacc tctatgagtt acacagcagc cagcgctact gtggggtctg cttgggtctg
     1141 ctggccagcc agcacggcct gcccaggttc ctgggccgcg ctctggcggt ggcctttgct
     1201 gtgagtgatc tagcagctgt ggccctcatc aacaaggact tcctgaacac gtcagaggcc
     1261 gtgcggttct ggactccgct caccatctgc tacacgctgc tggtcatcta catgcagggt
     1321 gagagccccg gggctgaggt cccctccatt ggccacacat cccagccacc cagtccaggg
     1381 acaggacttt actgtaggct cctcagatgt catataggag ccctaaagac ccggcacctg
     1441 ggtttgtctt caggactaga ggagcagcag caccgcttca gcctacaggg ccaggtccag
     1501 acggttctgg tgcgcatggc tggcctcttt gttctgttga tgacggtggg cctctggctg
     1561 gacctcctgg gtatctttgt ctcccttttg ggtgagctat ggtgcttagc aggtattcgc
     1621 gtcttaatcg acctctgcca gatacaggta ggtaccttta gggaccccca gcctcccact
     1681 ccgtccccaa ggtttccagc aacccccaga gacctaattt tgataagagt tgggagggca
     1741 agggacccgg ttgtcattaa ggagtgggga gctgggtgcc agggaccact ccggctggca
     1801 tcctgggagg gtcccagagg gtaggaaggt cctgatgata gtagacctga gactggacta
     1861 aggggatgtg tcccttctga ccctccccca gggctttcca ccccagaggc ctacagtaac
     1921 agtagcagta acagcagaag gagaatcaag atggacaggt ccatccgagc cccagccttc
     1981 cacacctgcc ccagccagaa gagcggtccc ctcctgactt gctctgagga ggatgtgaag
     2041 tcagtttcag gcctacatgg gctaaccaca gcaaggtctt gaccacaaga tgtggcctga
     2101 aggccgagtg gcagagctgg tccccaccta gacttttggg caggccatgg gggtggggtg
     2161 ggggctctgg agaaaggggg tgaccagggc tggagagcta gagaggccgg gacatgaatc
     2221 cttctgtgtt gaagatgggc agcttcgcca gacccacttt tcttggccca gcaagaagac
     2281 agaggacaat tgtgacctca gaatgacccc tgccctttgg ccaccccccc ccttgctctc
     2341 aagaagacaa taaaggtgac ttttctcaa
//
