LOCUS       NM_001108643            3368 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus transmembrane protein 72 (Tmem72), mRNA.
ACCESSION   NM_001108643 XM_001055587 XM_342744
VERSION     NM_001108643.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473964.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_342744.3, XM_001055587.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC161866.1, CK481068.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..3368
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /note="transmembrane protein 72"
                     /db_xref="GeneID:362424"
                     /db_xref="RGD:1308850"
     exon            1..408
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /inference="alignment:Splign:2.1.0"
     CDS             339..1166
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /codon_start=1
                     /product="transmembrane protein 72"
                     /protein_id="NP_001102113.1"
                     /db_xref="GeneID:362424"
                     /db_xref="RGD:1308850"
                     /translation="MKLQVFWTGLEYTCRLLGITTAAVLIGVGTETFLRGRFKSLAFY
                     LLFTGVTISVCEGTYFVAQLLAICFKCQPGSLAHRAKEKAHWLGCFQKFLAYMLLSVA
                     CFLHPVLVWHVTIPGSMLIITGLAYFLLSKRKKKKAAPEVMPPTEQYRDPSSSIVSTT
                     GSGDTEQTYTFHEAFKEGPSSFLIHMKSILKGTKKPRVLQAQDTLMELALEPADSLAK
                     KKQVHFEDNVVRIIPSLTEGLGDSDSGPEETSSDTTPIIPPSQTPLFLPSLMATDLF"
     exon            409..475
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /inference="alignment:Splign:2.1.0"
     exon            476..547
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /inference="alignment:Splign:2.1.0"
     exon            548..687
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /inference="alignment:Splign:2.1.0"
     exon            688..3368
                     /gene="Tmem72"
                     /gene_synonym="RGD1308850"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taatcagcct gatctcaggc agctacacag gagccgaagc agctccaggc taggccaggg
       61 ctgtgtggag agaggagagc gttcttccga gataatgatt aaactgagca gcacttggca
      121 agggcacccg ctgctaaact aaggaggtga gccccattca cacctcagcc aggctgtgga
      181 gcccggagct agttcatgga ggctgagctc agaggcccag gggcccccag ccagcccctg
      241 tagccttctg cgcttgtgcg gagcatccag agcatctcag atacagggga atctttgcag
      301 cctgctcttc tgggactctg ttcacacccc ctggcaccat gaagctccaa gtattctgga
      361 ctggactgga gtatacctgc cggctattgg gcatcaccac ggctgcagta ctgattggag
      421 tgggcactga gaccttcctc cgggggcggt tcaaaagcct ggccttctat ctgctgttta
      481 caggagtcac catctctgtg tgtgaaggga cctactttgt ggctcaactg ttggccatct
      541 gcttcaagtg tcagccgggg tctctggcac acagagcaaa ggagaaggcc cactggctgg
      601 gctgcttcca gaagttcctc gcctacatgc tgctgtcagt ggcctgtttc ctccaccctg
      661 ttctggtctg gcatgtgacc ataccaggct ccatgctaat catcactggc ctggcctact
      721 tcctgctgag caaacggaag aaaaaaaagg ctgccccaga ggtgatgccc cccacggagc
      781 agtacaggga cccttccagc agcattgtga gtaccacagg ctctggggac actgagcaaa
      841 cctatacttt ccatgaggcc ttcaaggagg ggcccagctc attcctcatc cacatgaaga
      901 gcatcctgaa ggggaccaag aagccacgtg tcctgcaggc ccaagatacc ctaatggaac
      961 tggctctaga gccagctgac tccttggcca agaaaaagca ggtacacttt gaagacaatg
     1021 tggtcagaat catcccatcg ctcactgaag gtctaggtga tagtgacagt gggccagagg
     1081 aaaccagttc tgacacaacc cccatcatcc ctccctccca gaccccactc tttctgcctt
     1141 ctctcatggc cactgacctg ttctgagctt ctcagctaga ggtctacaga tggacggacc
     1201 tgccagaaga ttcctaatag tcacagttcc tacagggaac tcagggtctc tgttggtcag
     1261 ctactcacat cctcgtggtg tctgggcact cagaacaatg acatagtgta ccaagtgtac
     1321 caagactgtg gtgacctcca gcaaggcaca aatgaagctt tgccatgtgg catcaacaca
     1381 ggctccttct tggcaagggg tagtgaaaga gaccatggct tcattctcca cgaggctgct
     1441 gacccaactt tctaagccct aaaggaacag aaaacatgag ttcacccctg cacccaacaa
     1501 agggttcagc cttcagtaag aactctatgg gacgttttgc ttgtgattaa gcctactggt
     1561 gccaaaggcc aagggctata ctggcagcat aatcgagatt gctcagagga catatgagaa
     1621 aggaagactt ggctctcagt tgagaacagc ctggcagtgg gctacattct cagcatactc
     1681 tgggaccggg ctgggcagca ggcatttcag aatctcccag gaaaacaata gctctctgtg
     1741 ctccctgcca gacaagctga ccagaagagc atctctcatt cctgaaggct agctcagagc
     1801 ttcctgccct cccctcatct aacccccatc caactgtgtg ggcaacgttc agagtccaag
     1861 tagacggtgt agatggttca ctataagaga gtctgagagc ctgtgggcat ctgtagcaga
     1921 aatggctagg acatcgcatg gaatagtcat tgtagttcag gttccaaggg actgtcccca
     1981 gagagccaca tggcacagga agtacctctg ccatgcttag atacctggga gaagaacctc
     2041 tgataaggag atgatcactc aaaatagaca ggaggggaga aagcagaggg aaggggagag
     2101 ggttgtgggc agccaggcat ggctgcatcc tggagttaca gaggtggcag tgaatttgat
     2161 ttagatattt ctcagagaaa agattagcaa gacactttgt aattctaaat agtatgttta
     2221 gtccacagga ttactgccag gaaaaagaga catgttattc ttcatagcta acacccagca
     2281 tgtgagcaac aatgaattga gagtcctata tcttgtgtct gaggagggga cctgtttcag
     2341 ggccctctga tgggtaagcc tcatagcatt tatagtctag ataaagaacg tgtttattgt
     2401 ataatgatca gtgcctatga gatttttttg tttttgtttt gcttggtttg gttttggaaa
     2461 cacgtagaca tgaggcaacc tagaagtcag tattagcctg gtacttagca cagccagcaa
     2521 cccagatgga cagaacatgt tttgcaatag agaatgtgtt tgctaagact gtgaggagtg
     2581 aaggcaggaa gcaagccagg gggcctggag taagtaggca tggcctactc aactcatcca
     2641 aagatctacg tctgatggat gaccacgggg gtatttaaac tgtttctttg acttttccaa
     2701 tggaggatgt tggatagtgc agtcagggga aaataaaata tatggaatat aggggaatgt
     2761 ccccattact atggggacct gacagtgagg aagaacaaga gagcaccacc atgacactga
     2821 atttgtgtaa ggcaaggcca gtgcagaccc aggaggtgac tcttaactcc agattgcaag
     2881 gctggaactc agggagcaga gcttgcagcc tgactgaggc caagggccag agggaagaaa
     2941 tcccttaacc aagaggagcc aggtactctc tctgagtctc tgtattcatt actttctgac
     3001 actgagataa aataccatgg acaaaagcca cttaaggaag agacagtgta tgtggctgac
     3061 agttccagag agctagagtc cgtgataaca gagacgacct ggcatgcagc cggagataga
     3121 agccagccgg tcacatttca tccacacacg ggaaatgagg gagaatgggg agggcaatgt
     3181 gacatgaggc tgtgaaccct caaagcccac ccccacggat gcacttcctc cagcaaggct
     3241 gcaccccgta aagctcccat aacttcccca aacagtgtca ctaactggat gagtgactga
     3301 catttttcac ccaaaccact gcagtctctc atcagcttgt acagtgctag aaatcggtgg
     3361 ctcctggt
//
