LOCUS       NM_001271215            1258 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 71 (Tmem71), mRNA.
ACCESSION   NM_001271215 XM_002726934
VERSION     NM_001271215.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On Sep 8, 2012 this sequence version replaced XM_002726934.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643292.30296.1,
                                           SRR26643296.20122.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760386,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-164               JAXUCZ010000007.1  100204806-100204969 c
            165-245             JAXUCZ010000007.1  100203306-100203386 c
            246-306             JAXUCZ010000007.1  100201783-100201843 c
            307-519             JAXUCZ010000007.1  100197416-100197628 c
            520-668             JAXUCZ010000007.1  100191477-100191625 c
            669-857             JAXUCZ010000007.1  100182439-100182627 c
            858-933             JAXUCZ010000007.1  100178428-100178503 c
            934-995             JAXUCZ010000007.1  100172830-100172891 c
            996-1056            JAXUCZ010000007.1  100172668-100172728 c
            1057-1258           JAXUCZ010000007.1  100167344-100167545 c
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q33"
     gene            1..1258
                     /gene="Tmem71"
                     /note="transmembrane protein 71"
                     /db_xref="GeneID:690657"
                     /db_xref="RGD:1593414"
     exon            1..164
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            165..245
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     CDS             206..1072
                     /gene="Tmem71"
                     /codon_start=1
                     /product="transmembrane protein 71"
                     /protein_id="NP_001258144.1"
                     /db_xref="GeneID:690657"
                     /db_xref="RGD:1593414"
                     /translation="MYRVPQLMSTPVANSSRSGGGPSGKLSPTRLFPSFTCDFLDGER
                     SFECCSIDPLTGSYYICRRSPRLLTNGYYIWTEDSFLCDPDGHITLNPSHTSVMYKEN
                     LVRIFRKKRRTHRSLSSVLDPRASKSWLHASIFGDVGSLPSEDLWLEGIRSLGSDLDC
                     SSLSDGWESQKPITDTSESSSTGHLLLQPLGESSQSSSLQLQMKTSGHFEKNMLVHSR
                     AGLMHKLSFQAILLAMCLIISACTRWFVGGELTSIFTCALLITIAYVVKSLFLNLASY
                     FKATTCARFDST"
     exon            246..306
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            307..519
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            520..668
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            669..857
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            858..933
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            934..995
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1056
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1258
                     /gene="Tmem71"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtaacttct cacccgttga cattctgatg ggattttttt cagctgaaga acggcttggt
       61 ccagctctct gcactgccaa ccacagggaa gtttcgcatt tcagtaatct gcctgtcatt
      121 tatcagttgg aagaagagcc ttgggactcc ctgtggagga atataaaaaa aaatctgtga
      181 agtttgaaca agcggccttc tcaagatgta ccgagtcccg caactgatgt cgacaccagt
      241 agcaaattct tccagatcag gaggaggacc ttctggaaag ttgtccccca cacgcctttt
      301 cccaagcttt acttgtgact tcctggatgg agagcgttct tttgaatgct gctccataga
      361 ccccctgaca ggctcctact atatctgccg cagaagcccc cgactcctaa ccaatggcta
      421 ctacatttgg actgaggaca gtttcctctg tgacccagat ggccacatca cactgaatcc
      481 ctctcacacc agtgtgatgt acaaggagaa cttagttaga atatttagaa agaaaaggag
      541 aacccaccgt tctctttctt cagtcttgga cccccgcgcc tcgaagtctt ggctgcatgc
      601 aagtatcttt ggagatgttg gttcactccc aagtgaggat ctctggctgg agggaatcag
      661 gagccttgga agtgatctag actgttcttc tctgagtgat ggctgggagt ctcagaagcc
      721 aatcacagac acatcagaat cctcttctac tggccacctc ctgcttcagc ctctcggaga
      781 aagctcccag agttcctctc ttcagcttca gatgaaaaca tcaggacatt tcgaaaagaa
      841 catgttggtg cattcaagag ctggtttgat gcataagctc tcctttcagg caatcctcct
      901 agccatgtgc ttaatcattt ctgcatgcac aagatggttt gtgggaggag aattaaccag
      961 catctttaca tgtgctttgc tgatcacaat agcttatgtt gtaaagtcac tgtttctcaa
     1021 ccttgccagc tatttcaaag ccaccacctg tgctagattt gacagcactt gaggaataca
     1081 tgtgatgaat gtcctccatc tgggaacagt aatttggagt cttcttggaa tcaaccactt
     1141 tattgaaagg gaatggataa cagaaaagtt aatgttgttt tcttttaaaa aaaaaaactc
     1201 taatctccac atgtaatagt aattggttca tgacaataat attaattttc ctttcttt
//
