LOCUS       XM_039109759            2517 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 68 (Tmem68),
            transcript variant X5, mRNA.
ACCESSION   XM_039109759
VERSION     XM_039109759.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039109759.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2517
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /note="transmembrane protein 68; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 11 ESTs, 4 long SRA reads, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 66 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
     CDS             319..1308
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /codon_start=1
                     /product="transmembrane protein 68 isoform X1"
                     /protein_id="XP_038965687.1"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
                     /translation="MINNNQTCAAGQDSVPYVTCMLHVLEEWLGVEQLEDYLNFANHL
                     LWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDG
                     HAAVWHGYEVHGMEKIPEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVF
                     KIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALLSDETYNIIWGNRKG
                     FAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFKWLYEKFRYPFAPMYGGFPVKLRTF
                     LGDPIPYDPEVTAEELAEKTKNAVQALIDKHQRIPGNIRSALLDRFHKEQKAN"
ORIGIN      
        1 tcgcctacta gttctcagca tccgcaactc tctcggctct cggaacggac cgccgcagct
       61 ttttgtctga ggctaggcgt atctcttgtc tcatgacggt ccagtcccgc gagcctgatg
      121 gagctggagg gaaaagtgag accctagtgc cgaggccatt ggtacaggtt cacccccgct
      181 gcagcagggc tctgctctct gactgagtgg tgctgtgtta catggatctg tcatttctat
      241 tcagtcatca gttggcattg cagtaacacc tatggcaatg aagaaagaga cagaatttgg
      301 gattttcatc taaggaaaat gataaataac aaccagacgt gtgctgcagg gcaggactcc
      361 gtgccctacg tgacctgtat gcttcacgtg ctggaagagt ggttgggtgt ggaacagttg
      421 gaggactacc tgaattttgc gaaccatctc ttgtgggtct tcaccccgct gatcctttta
      481 atacttccgt actttaccat cttccttctc taccttacta ttattttcct ccacatctat
      541 aagaggaaga atgtgttaaa agaagcctac tctcacaact tgtgggatgg cgcgaggaaa
      601 acagtggcaa ccctgtggga tggacatgcg gcggtttggc atggttatga agttcacggg
      661 atggaaaaga taccagaagg accagcactt ataatttttt atcatggagc tattcccata
      721 gacttttact acttcatggc taaaattttc atccacaaag gcagaacttg ccgagtggta
      781 gctgaccact ttgtctttaa aatcccaggg ttcagtttat tacttgatgt attttgtgct
      841 cttcatggac caagagaaaa atgtgttgaa atcttgagga gtggtcactt gttagctatt
      901 tcaccgggtg gagttcgaga agccttactt agtgatgaaa cctacaacat catatggggt
      961 aatcgtaaag gctttgctca ggttgcaatc gatgcaaaag tgcccattat tcctatgttt
     1021 acacaaaaca tccgagaagg atttagatca ctcggaggaa caagattgtt taaatggctt
     1081 tatgaaaaat tccgctatcc gtttgctcca atgtatggag gttttcctgt gaagttgcgg
     1141 accttcttgg gtgatcctat tccgtatgac ccagaggtaa cagcagaaga attagctgaa
     1201 aagactaaga acgctgttca agctttgatc gacaagcacc aaaggatacc ggggaacatt
     1261 aggagtgctt tgctggaccg ctttcataaa gagcagaagg ctaattgaca gataatttcg
     1321 tgtgtctcta atgccaagtt tgcatctgtg gtactgcctt ttaaactttt gtaggttgta
     1381 taatagtctt tttaaaacct gctaatgagc atctttcttt agaatttaaa ctttctatgg
     1441 ttaatcttac cctttcaatc agttttgtca aatgtagtaa gtaactcacc atttgcttga
     1501 ctcagaagat gatcatgttg catttgcaat ccttagtagt atatgatagg cacaagtctt
     1561 cctggatacc agcagtctag gttaggcaga cttcactaaa ttatgcttct gtgtttgtgt
     1621 ctgttgtgcc aatgggatgg tgagaggtac ctgagctggg gtgtagcact tgcttagttt
     1681 aggtgagcgg tgcctttgta tccatccttc attccactca caactgctgg taagttgtga
     1741 aacgcttttg cacctccgtg gtttatgtta agcatggtaa tactgtggtg gtgaacatta
     1801 agttgcttat gtctactgtg atatatccgt atctatatat ctgatagata tctgtagtga
     1861 gaaatctgta attgaattga ttcctgaatc ctttaggagt tatgtacatt tttgtttatt
     1921 gggtattgaa attactcctt cagggatgat gtccagttgc caagcacaat gaaagagatg
     1981 tactattttg taaatcaaat cattgttatt tgtagtattt attaacagag ttgtttggta
     2041 tttattttaa acaaggatct aagtaaatgt ataggatgga ttgtcagcac gtgtcttaca
     2101 cggtgtaaag ataaaatcgt gggcacgctc tgcagtttat gttagagcag atcctaggct
     2161 gaggagtgac aactgaggaa gctctgcctc gcttgtccca gggctcgctt ccgtgctctg
     2221 cagccagtca cgtggttata tctgtaaaat gtacttgaat gatgaatttc tgtaaacatg
     2281 gagtcctctg aaaatgtaat tactttgaat tgttgtcttc ttgaaaactt attttaaaag
     2341 tatttaaaca gccaagtatc atgaattcat cgcagtgtgt cttccccctt tgcagtactt
     2401 gggttttata tggacttttt aactacaagt gtatatttgt gatatgtata atgtatgtat
     2461 aatgtatata gaaatggtgt gaaaataaag ctgaactgca actcctctct agtaaaa
//
