LOCUS       XM_039109756            2789 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 68 (Tmem68),
            transcript variant X2, mRNA.
ACCESSION   XM_039109756
VERSION     XM_039109756.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039109756.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2789
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2789
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /note="transmembrane protein 68; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 11 ESTs, 5 long SRA reads, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 84 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
     CDS             591..1580
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /codon_start=1
                     /product="transmembrane protein 68 isoform X1"
                     /protein_id="XP_038965684.1"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
                     /translation="MINNNQTCAAGQDSVPYVTCMLHVLEEWLGVEQLEDYLNFANHL
                     LWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDG
                     HAAVWHGYEVHGMEKIPEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVF
                     KIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALLSDETYNIIWGNRKG
                     FAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFKWLYEKFRYPFAPMYGGFPVKLRTF
                     LGDPIPYDPEVTAEELAEKTKNAVQALIDKHQRIPGNIRSALLDRFHKEQKAN"
ORIGIN      
        1 tccgcaactc tctcggctct cggaacggac cgccgcagct ttttgtctga ggctaggcgt
       61 atctcttgtc tcatgacggt ccagtcccgc gagcctgatg gagctggagg gaaaagtgag
      121 accctagtgc cgaggccatt ggtacaggtt agaactgttg gtgagctgac tgagcagggt
      181 tggaatgctg gtttatgctc tttagtaccc atgtgacttt tggcaagcca cttggcctct
      241 aggagcagcg tctgactact tataaaaaag ggttgaatag caataattat cccacgaggc
      301 tccggagagg atccaaggaa acagcactta caaactttta tatttgtgca aattcgactt
      361 ggtccagatc ctgtagatgc tgcgctgccg cgatcgctgg gttttgtaat cagttaaaca
      421 tttgtaagaa ataatatgcg ttcacccccg ctgcagcagg gctctgctct ctgactgagt
      481 ggtgctgtgt tacatggatc tgtcatttct attcagtcat cagttggcat tgcagtaaca
      541 cctatggcaa tgaagaaaga gacagaattt gggattttca tctaaggaaa atgataaata
      601 acaaccagac gtgtgctgca gggcaggact ccgtgcccta cgtgacctgt atgcttcacg
      661 tgctggaaga gtggttgggt gtggaacagt tggaggacta cctgaatttt gcgaaccatc
      721 tcttgtgggt cttcaccccg ctgatccttt taatacttcc gtactttacc atcttccttc
      781 tctaccttac tattattttc ctccacatct ataagaggaa gaatgtgtta aaagaagcct
      841 actctcacaa cttgtgggat ggcgcgagga aaacagtggc aaccctgtgg gatggacatg
      901 cggcggtttg gcatggttat gaagttcacg ggatggaaaa gataccagaa ggaccagcac
      961 ttataatttt ttatcatgga gctattccca tagactttta ctacttcatg gctaaaattt
     1021 tcatccacaa aggcagaact tgccgagtgg tagctgacca ctttgtcttt aaaatcccag
     1081 ggttcagttt attacttgat gtattttgtg ctcttcatgg accaagagaa aaatgtgttg
     1141 aaatcttgag gagtggtcac ttgttagcta tttcaccggg tggagttcga gaagccttac
     1201 ttagtgatga aacctacaac atcatatggg gtaatcgtaa aggctttgct caggttgcaa
     1261 tcgatgcaaa agtgcccatt attcctatgt ttacacaaaa catccgagaa ggatttagat
     1321 cactcggagg aacaagattg tttaaatggc tttatgaaaa attccgctat ccgtttgctc
     1381 caatgtatgg aggttttcct gtgaagttgc ggaccttctt gggtgatcct attccgtatg
     1441 acccagaggt aacagcagaa gaattagctg aaaagactaa gaacgctgtt caagctttga
     1501 tcgacaagca ccaaaggata ccggggaaca ttaggagtgc tttgctggac cgctttcata
     1561 aagagcagaa ggctaattga cagataattt cgtgtgtctc taatgccaag tttgcatctg
     1621 tggtactgcc ttttaaactt ttgtaggttg tataatagtc tttttaaaac ctgctaatga
     1681 gcatctttct ttagaattta aactttctat ggttaatctt accctttcaa tcagttttgt
     1741 caaatgtagt aagtaactca ccatttgctt gactcagaag atgatcatgt tgcatttgca
     1801 atccttagta gtatatgata ggcacaagtc ttcctggata ccagcagtct aggttaggca
     1861 gacttcacta aattatgctt ctgtgtttgt gtctgttgtg ccaatgggat ggtgagaggt
     1921 acctgagctg gggtgtagca cttgcttagt ttaggtgagc ggtgcctttg tatccatcct
     1981 tcattccact cacaactgct ggtaagttgt gaaacgcttt tgcacctccg tggtttatgt
     2041 taagcatggt aatactgtgg tggtgaacat taagttgctt atgtctactg tgatatatcc
     2101 gtatctatat atctgataga tatctgtagt gagaaatctg taattgaatt gattcctgaa
     2161 tcctttagga gttatgtaca tttttgttta ttgggtattg aaattactcc ttcagggatg
     2221 atgtccagtt gccaagcaca atgaaagaga tgtactattt tgtaaatcaa atcattgtta
     2281 tttgtagtat ttattaacag agttgtttgg tatttatttt aaacaaggat ctaagtaaat
     2341 gtataggatg gattgtcagc acgtgtctta cacggtgtaa agataaaatc gtgggcacgc
     2401 tctgcagttt atgttagagc agatcctagg ctgaggagtg acaactgagg aagctctgcc
     2461 tcgcttgtcc cagggctcgc ttccgtgctc tgcagccagt cacgtggtta tatctgtaaa
     2521 atgtacttga atgatgaatt tctgtaaaca tggagtcctc tgaaaatgta attactttga
     2581 attgttgtct tcttgaaaac ttattttaaa agtatttaaa cagccaagta tcatgaattc
     2641 atcgcagtgt gtcttccccc tttgcagtac ttgggtttta tatggacttt ttaactacaa
     2701 gtgtatattt gtgatatgta taatgtatgt ataatgtata tagaaatggt gtgaaaataa
     2761 agctgaactg caactcctct ctagtaaaa
//
