LOCUS       XM_006237827            2501 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 68 (Tmem68),
            transcript variant X1, mRNA.
ACCESSION   XM_006237827
VERSION     XM_006237827.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006237827.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006237827.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2501
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /note="transmembrane protein 68; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 13
                     ESTs, 9 long SRA reads, 9 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 186 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
     CDS             303..1292
                     /gene="Tmem68"
                     /gene_synonym="RGD1309006"
                     /codon_start=1
                     /product="transmembrane protein 68 isoform X1"
                     /protein_id="XP_006237889.1"
                     /db_xref="GeneID:312946"
                     /db_xref="RGD:1309006"
                     /translation="MINNNQTCAAGQDSVPYVTCMLHVLEEWLGVEQLEDYLNFANHL
                     LWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDG
                     HAAVWHGYEVHGMEKIPEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVF
                     KIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALLSDETYNIIWGNRKG
                     FAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFKWLYEKFRYPFAPMYGGFPVKLRTF
                     LGDPIPYDPEVTAEELAEKTKNAVQALIDKHQRIPGNIRSALLDRFHKEQKAN"
ORIGIN      
        1 acggttctac acccaatgtg gctcgggctt cttcctctca ggtgtttaaa gaaagccggc
       61 gctatctgag agtccgcctc tccggggtca accgcggact agctgccgac gtcgccgagg
      121 ataacctgat cttctgtgac ttccttgtca ggttcacccc cgctgcagca gggctctgct
      181 ctctgactga gtggtgctgt gttacatgga tctgtcattt ctattcagtc atcagttggc
      241 attgcagtaa cacctatggc aatgaagaaa gagacagaat ttgggatttt catctaagga
      301 aaatgataaa taacaaccag acgtgtgctg cagggcagga ctccgtgccc tacgtgacct
      361 gtatgcttca cgtgctggaa gagtggttgg gtgtggaaca gttggaggac tacctgaatt
      421 ttgcgaacca tctcttgtgg gtcttcaccc cgctgatcct tttaatactt ccgtacttta
      481 ccatcttcct tctctacctt actattattt tcctccacat ctataagagg aagaatgtgt
      541 taaaagaagc ctactctcac aacttgtggg atggcgcgag gaaaacagtg gcaaccctgt
      601 gggatggaca tgcggcggtt tggcatggtt atgaagttca cgggatggaa aagataccag
      661 aaggaccagc acttataatt ttttatcatg gagctattcc catagacttt tactacttca
      721 tggctaaaat tttcatccac aaaggcagaa cttgccgagt ggtagctgac cactttgtct
      781 ttaaaatccc agggttcagt ttattacttg atgtattttg tgctcttcat ggaccaagag
      841 aaaaatgtgt tgaaatcttg aggagtggtc acttgttagc tatttcaccg ggtggagttc
      901 gagaagcctt acttagtgat gaaacctaca acatcatatg gggtaatcgt aaaggctttg
      961 ctcaggttgc aatcgatgca aaagtgccca ttattcctat gtttacacaa aacatccgag
     1021 aaggatttag atcactcgga ggaacaagat tgtttaaatg gctttatgaa aaattccgct
     1081 atccgtttgc tccaatgtat ggaggttttc ctgtgaagtt gcggaccttc ttgggtgatc
     1141 ctattccgta tgacccagag gtaacagcag aagaattagc tgaaaagact aagaacgctg
     1201 ttcaagcttt gatcgacaag caccaaagga taccggggaa cattaggagt gctttgctgg
     1261 accgctttca taaagagcag aaggctaatt gacagataat ttcgtgtgtc tctaatgcca
     1321 agtttgcatc tgtggtactg ccttttaaac ttttgtaggt tgtataatag tctttttaaa
     1381 acctgctaat gagcatcttt ctttagaatt taaactttct atggttaatc ttaccctttc
     1441 aatcagtttt gtcaaatgta gtaagtaact caccatttgc ttgactcaga agatgatcat
     1501 gttgcatttg caatccttag tagtatatga taggcacaag tcttcctgga taccagcagt
     1561 ctaggttagg cagacttcac taaattatgc ttctgtgttt gtgtctgttg tgccaatggg
     1621 atggtgagag gtacctgagc tggggtgtag cacttgctta gtttaggtga gcggtgcctt
     1681 tgtatccatc cttcattcca ctcacaactg ctggtaagtt gtgaaacgct tttgcacctc
     1741 cgtggtttat gttaagcatg gtaatactgt ggtggtgaac attaagttgc ttatgtctac
     1801 tgtgatatat ccgtatctat atatctgata gatatctgta gtgagaaatc tgtaattgaa
     1861 ttgattcctg aatcctttag gagttatgta catttttgtt tattgggtat tgaaattact
     1921 ccttcaggga tgatgtccag ttgccaagca caatgaaaga gatgtactat tttgtaaatc
     1981 aaatcattgt tatttgtagt atttattaac agagttgttt ggtatttatt ttaaacaagg
     2041 atctaagtaa atgtatagga tggattgtca gcacgtgtct tacacggtgt aaagataaaa
     2101 tcgtgggcac gctctgcagt ttatgttaga gcagatccta ggctgaggag tgacaactga
     2161 ggaagctctg cctcgcttgt cccagggctc gcttccgtgc tctgcagcca gtcacgtggt
     2221 tatatctgta aaatgtactt gaatgatgaa tttctgtaaa catggagtcc tctgaaaatg
     2281 taattacttt gaattgttgt cttcttgaaa acttatttta aaagtattta aacagccaag
     2341 tatcatgaat tcatcgcagt gtgtcttccc cctttgcagt acttgggttt tatatggact
     2401 ttttaactac aagtgtatat ttgtgatatg tataatgtat gtataatgta tatagaaatg
     2461 gtgtgaaaat aaagctgaac tgcaactcct ctctagtaaa a
//
