LOCUS       NM_001398973            2657 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 62 (Tmem62), mRNA.
ACCESSION   NM_001398973 XM_230497
VERSION     NM_001398973.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Dec 29, 2021 this sequence version replaced XM_230497.10.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ210040.1, SRR26643285.12880.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-215               JAXUCZ010000003.1  128381616-128381830
            216-327             JAXUCZ010000003.1  128382054-128382165
            328-465             JAXUCZ010000003.1  128383561-128383698
            466-511             JAXUCZ010000003.1  128386037-128386082
            512-653             JAXUCZ010000003.1  128391061-128391202
            654-778             JAXUCZ010000003.1  128393384-128393508
            779-901             JAXUCZ010000003.1  128393638-128393760
            902-1057            JAXUCZ010000003.1  128396724-128396879
            1058-1217           JAXUCZ010000003.1  128399683-128399842
            1218-1331           JAXUCZ010000003.1  128402601-128402714
            1332-1416           JAXUCZ010000003.1  128405508-128405592
            1417-1521           JAXUCZ010000003.1  128409064-128409168
            1522-1640           JAXUCZ010000003.1  128412448-128412566
            1641-2657           JAXUCZ010000003.1  128414567-128415583
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..2657
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /note="transmembrane protein 62"
                     /db_xref="GeneID:311350"
                     /db_xref="RGD:1305647"
     exon            1..215
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1967
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /codon_start=1
                     /product="transmembrane protein 62"
                     /protein_id="NP_001385902.1"
                     /db_xref="GeneID:311350"
                     /db_xref="RGD:1305647"
                     /translation="MARMLAVRVAAGLAAAALAALLLEHYGLAGPSTPLPKPRGSQRP
                     HPAPGSDANNIFWGLQISDIHLSRFQDPGRALALEKFCSETIDIIQPALVLATGDLTD
                     AKTKEHLGSRQHEVEWQTYQRILKKTRVMEKTKWLDIKGNHDVYNIPSLESITNYYRK
                     YSAVRKDGSFHYIHSTPFGNYSFISVDATQRPGPKRPYNFFGILNEKQMEELLSFSKK
                     SSQSNQTIWFGHFTTSTILSPSPGIRTVMGSATAYLCGHLHTLGGLMPVLHTRHFTGT
                     LELEVGDWKDNRRYRIFAFDHDLFSFADVTFDKWPVALITNPKSLLYSCAKHEPLERL
                     FYSTHIRVLAFSLSPITSVTVKIDGGDIGQASHLSGPIFILKWNPRNYSNGTHTIEVF
                     VQDSAGRSTSARHIFSAQENTHLTFDPLASFILLTDHYIVARVLFVLIVLIQLTVLIT
                     FRYLAYPELREPLGFANMTTFSLHILSKINISYYSVLLLTLYTVLGPWFVGEIIDGKW
                     GCCFSFGIVVDGHFLQGGLTFISGIIQLVFFNIPLTAYTCWSLLQRCFGHNFRSHLLQ
                     GRYVQIIPVHLLMLLLYTWQVYSCYFLHVTYGSLAFLLSPLRTWLTLLTPVLVYRVWT
                     LNSTELGIFMVQLKSHLSS"
     exon            216..327
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            328..465
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            466..511
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            512..653
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            654..778
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            779..901
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1057
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1058..1217
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1218..1331
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1332..1416
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1521
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1522..1640
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
     exon            1641..2657
                     /gene="Tmem62"
                     /gene_synonym="RGD1305647"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aagtgcgggc cggagcgctc cggtgctgcg ccgcgatggc gagaatgctg gccgtccggg
       61 tggcggcggg gctggcggcc gccgcgctgg ccgccctgct tttggagcac tacggcctgg
      121 ctgggccgtc cacgccgctg ccgaagccca gaggctccca gaggccgcac cccgccccgg
      181 gctcagatgc caacaacatc ttctggggtc tgcagatatc cgacattcac ctgagcaggt
      241 ttcaagatcc aggcagagcg ttggccttag agaagttctg ttcggaaact attgacatca
      301 ttcaaccggc tcttgtcctg gccactggag acctgacaga tgccaaaaca aaggaacact
      361 tgggatccag acaacatgaa gtagaatggc aaacttacca gagaattctg aagaagacaa
      421 gagttatgga aaaaaccaag tggctggata tcaaaggaaa tcatgatgta tataacatcc
      481 caagtctgga gagcatcacc aactattaca ggaagtactc cgcggtgcgc aaggacggct
      541 ccttccatta catccacagc actcctttcg gcaactactc cttcatctcc gtggacgcca
      601 cccaaaggcc agggcctaag agaccctata atttcttcgg gattttaaat gagaaacaga
      661 tggaggaact cttatcattt tccaagaaaa gtagtcagag caaccagacc atttggtttg
      721 gccactttac aacatcaacg atcctgtctc catccccagg gatccggacc gtaatgggtt
      781 cggctacagc ttatctgtgt gggcacctcc atacgctcgg tgggctgatg cccgttctgc
      841 acactcgcca ctttacaggc acgctggaac ttgaagtggg agactggaaa gacaacagaa
      901 ggtaccggat ctttgccttt gatcacgacc tctttagctt tgcagatgta acctttgaca
      961 agtggcctgt ggctcttatc accaatccta agtcactcct ctatagttgt gctaagcatg
     1021 aaccactaga aaggctcttc tattccacac acataagagt attggccttt tccttatccc
     1081 ccatcacttc tgtcactgtt aagattgatg gaggtgatat aggccaggct tctcatttgt
     1141 ctggtcctat tttcatactg aagtggaacc ctagaaacta cagtaatggg acacatacca
     1201 tagaagtatt cgtccaggat tctgctggaa ggagtacgag tgctcgccac atattttctg
     1261 ctcaggagaa tactcatctc acatttgacc ctttggcatc ctttattctc cttactgacc
     1321 actacatcgt ggcccgggtg ctgtttgtgt tgattgtgct gatacagctc accgtgctca
     1381 ttacattcag atatctagca tacccggagc tgagagaacc tctgggattt gcaaacatga
     1441 ccacattttc ccttcatatc ttgagcaaaa taaacatctc ctactattct gttttgttgc
     1501 tgaccttgta tacagtgctg ggaccatggt ttgttggaga gataattgac ggcaaatggg
     1561 gttgctgctt ttcatttggg atagttgttg atggacactt cctgcaaggt ggtctaacat
     1621 ttataagtgg aattatacag ctggtgttct ttaacatccc cttgacggct tacacatgct
     1681 ggagtctgct acagcgctgc tttggtcaca acttcaggtc tcatctcctc cagggaagat
     1741 acgtgcagat tattcctgtt cacctgctta tgcttctact gtacacgtgg caggtttatt
     1801 cttgctactt ccttcatgtg acgtatggct ccctcgcctt tctactctcc ccattgagga
     1861 cctggttgac attgctgaca cctgtactcg tttatcgtgt gtggacactg aactccactg
     1921 aacttggaat attcatggtg cagttaaaaa gtcatctgag ctcctgaagt ccatggctta
     1981 ccgctagcgg cctggaagaa gtccagcctc cacatttgtg gcccagatct ctgccccagt
     2041 ggcagatggg aaagccagta tcagtgggtg agcttcagga agctgtcatt ccttggacgt
     2101 ctgaatgttg gaagtgttta ctactgattc ctgctgtgtg gactgcagaa aagtctaacg
     2161 aatgactctt cttcagaggc aaagagccct aatcaaggag attgccaggg tggggtctct
     2221 gtgtcactga gtccctcagc actgctgtat ttattaaggg tcatcctgtg aaaagcatcc
     2281 agcccaaact tggaattcag gatgccattt tatgcctagg gaacctgtgg aaagtgggcc
     2341 tttaccgctc ctgagacttg acttccaagc ctgttttccc aagaattatg ggcttcctgc
     2401 ttccttagtc aaagctgttt tcaactaata aatgaatgaa tgataaccac aaacattggg
     2461 ttggagagat cagtggttaa gagcatgtac tttacctcca gaagacctga gttcaattcc
     2521 tagcaaccat gtcagatgct cacaactgcc tgtaactcta gttccaggcc agagccactg
     2581 tggacaccta catttatatg tgcacagact tacacgtaat ttaaaaaaat aataaaagat
     2641 aagtattaac aaagaaa
//
