LOCUS       NM_001107964            1291 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 53 (Tmem53), mRNA.
ACCESSION   NM_001107964 XM_001067384 XM_233431
VERSION     NM_001107964.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001067384.1, XM_233431.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ219156.1, CB718877.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               JAXUCZ010000005.1  135958699-135958847
            150-265             JAXUCZ010000005.1  135970707-135970822
            266-1150            JAXUCZ010000005.1  135973215-135974099
            1151-1291           JAXUCZ010000005.1  135974118-135974258
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1291
                     /gene="Tmem53"
                     /gene_synonym="RGD1307066"
                     /note="transmembrane protein 53"
                     /db_xref="GeneID:313529"
                     /db_xref="RGD:1307066"
     exon            1..149
                     /gene="Tmem53"
                     /gene_synonym="RGD1307066"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..919
                     /gene="Tmem53"
                     /gene_synonym="RGD1307066"
                     /codon_start=1
                     /product="transmembrane protein 53"
                     /protein_id="NP_001101434.1"
                     /db_xref="GeneID:313529"
                     /db_xref="RGD:1307066"
                     /translation="MASAELDYSIEIPDQPCWSQKNSQGGKEAGKQQPVVILLGWGGC
                     RDKNLAKYSAIYHKRGCIVIRYTAPWHMVFFSESLGIPSLRVVAQKLLELLFDYEIER
                     EPLLFHVFSNAGVMLYRYVLELLQTHQRFRHLHVVGTIFDSGPGDSDLIGALRALATI
                     LERRPAVLRLLLLAAFALVVVLFHFLFAPFTALFHTHFYDRLQDSGSCWPELYLYSRA
                     DKVVSARDVERMVEERLAHQVSVRGVDFVTSAHVSHLRDYPTYYTSLCVDFMHNCVQC
                     "
     exon            150..265
                     /gene="Tmem53"
                     /gene_synonym="RGD1307066"
                     /inference="alignment:Splign:2.1.0"
     exon            266..1291
                     /gene="Tmem53"
                     /gene_synonym="RGD1307066"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcgtggccc ggcggcgtcc gggcccgggc gaggtgaaac tgcgggagtt ccggcaggag
       61 gcccgtgctg acggcccgca acttcaccat ggcctcggcc gagctggatt acagcatcga
      121 gatcccggat cagccctgct ggagccagaa gaacagccaa ggtgggaagg aggccgggaa
      181 gcaacagcct gtggtgattc tcttgggctg gggtggctgc agggacaaga acctggccaa
      241 gtatagtgcc atctaccaca aaaggggctg cattgtgatc cgatacacgg ccccctggca
      301 catggtcttc ttctctgagt ccttgggcat tccctcactt cgtgtggtgg cccagaagct
      361 gcttgagctc ctctttgact atgagattga gcgggagcct ctgcttttcc atgtcttcag
      421 caatgccggc gtcatgctct accgctacgt gctggagctc cttcagaccc atcagcgctt
      481 ccgccatttg catgtggtgg gcaccatctt tgacagtggc cctggggata gcgacctgat
      541 aggggccctg agggccctgg caaccatcct ggagcgcaga cctgccgtgc ttcgcctgtt
      601 gctcctggca gcatttgcgc tggtggtggt cctgttccac ttcctgtttg ctccattcac
      661 ggccctcttc cacacccact tctacgacag gctgcaggat tcaggctcct gctggcccga
      721 gctctacctc tactctagag ctgataaggt ggtctcagcc agggatgtgg aacggatggt
      781 ggaggaacgc ctggctcacc aggtctcagt gcgcggagtg gacttcgtga catctgcgca
      841 tgtcagccac ctccgagact atcctactta ctatacaagt ctgtgtgttg acttcatgca
      901 taattgtgtc cagtgctgag gccctgctcc agaaataaat gccaacacct cccttcaacc
      961 tatatccatc ctgggggcta ctagcatggc tactccccct gatcctggga ttgggagtgt
     1021 ccaggcaggc ttctgcgggg cagccttaca gttactcgga caagtgtgat aggctgctga
     1081 ttcctacgat gtttggtctg taaagggtta acactctgtg tgtgtgtgtg tgtgtgtgtg
     1141 tgtgtgtgtg cgcgcgcgtg tgtgtgttag tgttaggtgg atgactccaa gcccagagtt
     1201 gtcttcaaaa ataacgtggg gttgaggaga gagctcaatt ggtaaagtgc tggctgtaca
     1261 gtcctgagtc caatctcaga actcacatta a
//
