LOCUS       NM_001109317            4130 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus transmembrane protein 47 (Tmem47), mRNA.
ACCESSION   NM_001109317 XM_001060274 XM_576973
VERSION     NM_001109317.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4130)
  AUTHORS   Bruggeman LA, Martinka S and Simske JS.
  TITLE     Expression of TM4SF10, a Claudin/EMP/PMP22 family cell junction
            protein, during mouse kidney development and podocyte
            differentiation
  JOURNAL   Dev Dyn 236 (2), 596-605 (2007)
   PUBMED   17195181
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473966.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_576973.2, XM_001060274.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132262 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4130
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq21"
     gene            1..4130
                     /gene="Tmem47"
                     /gene_synonym="RGD1564799"
                     /note="transmembrane protein 47"
                     /db_xref="GeneID:501569"
                     /db_xref="RGD:1564799"
     exon            1..456
                     /gene="Tmem47"
                     /gene_synonym="RGD1564799"
                     /inference="alignment:Splign:2.1.0"
     CDS             231..776
                     /gene="Tmem47"
                     /gene_synonym="RGD1564799"
                     /codon_start=1
                     /product="transmembrane protein 47"
                     /protein_id="NP_001102787.1"
                     /db_xref="GeneID:501569"
                     /db_xref="RGD:1564799"
                     /translation="MASAGSGMEEVRVSVLTPLKLVGLVCIFLALCLDLGAVLSPAWV
                     TADHQYYLSLWESCRKPANLDSWHCESTLGSDWQIATLALLLGGAAIILIAFLVGLIS
                     ICVGSRRRFYRPVAVMLFAAVVLQVCSLVLYPIKFIETVSLKIYHEFNWGYGLAWGAT
                     IFSFGGAILYCLNPKNYEDYY"
     exon            457..597
                     /gene="Tmem47"
                     /gene_synonym="RGD1564799"
                     /inference="alignment:Splign:2.1.0"
     exon            598..4130
                     /gene="Tmem47"
                     /gene_synonym="RGD1564799"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgaagattct ctgtgctttt gctgtcgctg cagcagcgga cgacctcctt agggctagac
       61 gtcccagcta ggcgagtccg ttgggcgctc ggtgtgctaa acagagcccc gaggtaggag
      121 ttctcggtgc gtgtgccgcc gcttttctgt tcgggaagtc cggttctggg ctcttcggac
      181 cctcctggcg tcctcgcctg agtcgtggag ggcggcagcg gcgcccgggc atggcttcgg
      241 ctggcagcgg catggaagag gtgcgcgtgt cggtgctgac cccgctcaag ctggtcgggc
      301 tggtgtgcat cttcttggcg ctgtgtctgg atctgggagc tgttctgagc ccggcctggg
      361 tcaccgcgga ccaccagtac tacctgtccc tgtgggagtc ctgcaggaag cccgccaacc
      421 tggatagctg gcattgcgag tccacgctcg gcagcgattg gcagatcgct actctggctt
      481 tactcctggg cggcgctgcc atcatactca ttgcattcct ggtgggtttg atttcaatct
      541 gtgtgggatc tcgaaggcgc ttctaccgac ctgttgctgt catgcttttt gcagcagttg
      601 ttttgcaggt ctgcagcctg gtcctttatc caatcaagtt tattgaaact gtgagcttga
      661 aaatttacca cgagttcaat tggggttatg gcctggcctg gggggcaact atattttcat
      721 ttgggggtgc cattctttat tgcctgaacc ctaagaatta tgaagactac tactgaagtc
      781 tgaaaacaca cacacacaca cacacacaca cacacacaca cacacacgca catgcacaca
      841 tgtgcacgtg cacgcgcaca cacacacaca cagcacacac acacacacac acacacagca
      901 cacacacaca cagcacacac gcagcacaca aaaaagagaa aacatccatc caacaaaaga
      961 tttatgttga catcatttct aattctattt tctaaaacac ttgtggagcc tcaagcagtt
     1021 tgctcagttg atttaatagc ctttgccttt tgtctgccaa catcataacc agcttttata
     1081 tccattttag ggacctgcac aaattaagag cactgattag atataggcat atgcttcaaa
     1141 cttccaatat gctcatgcta tttttcttga catgtgaagg gtctgtatga cagcaaccat
     1201 tgttggaatg agaattgcca gtctcttatt gccttcaggg gaacagctgg cctaagtgac
     1261 atgtaaaatt cctttgctct tacaacattt ctactggtgg agcccttatc acctgtttat
     1321 accacacagt gactatcttg gttattggtg acttgcttca gtgagttttt ggaaagcaaa
     1381 actgtccttt ggacatctaa tgagaatcat agatatagcc atttaattct accttaaggt
     1441 tattcttttt aatagcaagt tattgtttgc caattgtcat ctcctgggaa gaaaatcaag
     1501 gtttggagac atgtgttttt cattatgcag ttacagggtg tctgctttcc cctggggcaa
     1561 tcagaaagac atgcccatga gttgcttttg taccctttaa agccctttac acagttttgc
     1621 agcaaacaat tgtccatatg taacaagctt tttcttcaca ccattggcca ttctatactg
     1681 gtaataagtt gttcattaat agtctacata catgtatcta tcattcatat aatcaatact
     1741 tgctctagtg aagcaatttg aacactaacc ttgtatgcat taacagactt agattggtat
     1801 tcacagttat ttaccataca aaaattcata taccttaaag cttttgctct gtgttctcta
     1861 ctgattcatt ggaaagtgtt aatagaattg cctaagaaaa aaattgaaat gctgttaatc
     1921 tgaaattaat gattctttta taagcattgt agttcaaaag agagtagaat taggatgatc
     1981 attttgtgta acattcatta aaatataagg ctgctatttt tgcaagtatt ttaaatgtct
     2041 tcattttaaa ataaaggaat agtgatagat ttatattaat gtctaaatgt ctcagtagac
     2101 aagtagtgtt ccgctttcac ctggtcctct gaattgaagt gatgggctaa ctgattcgtg
     2161 cacacaagta tgatgaattt atgataggga aatcattcac tgactgttcc aagggaagaa
     2221 agtatcaaca ataaggtata agtttgcaat gaatctctac tgcaaacttg tgttaattct
     2281 ctttattata caaatctgga tagtttaact ataaacctat ttttatataa aatatacaat
     2341 tctgaaagga aacttataaa tgattatttt tgttaactaa gacattaaag caagtttact
     2401 cttgtttgac cctcttgaag acagaaacat tggggaagaa atctttaaaa tatatctatt
     2461 tactaatata ttatacaatc cattaagaga aggactgtgt caatagtatt taataatttg
     2521 ctttacctcc cacagcagac ttctgctttc agcttatctt aagaatggtt gccaaaaaca
     2581 actgcctttc cctgacccta aaatattgta ttcaaatgtc aaaatcaatt gtgatttttt
     2641 tatggaatcg aagtaaatat gaatacctaa ttcattctta ttttagtagt gatagacaaa
     2701 cattattaaa tgcatattag agatcaacct ttatgaaaat gtgtgattct atcaagaatc
     2761 ataaggaact gaatagaaaa attacagaaa gttattaata ttatataata ttttgaagca
     2821 gctttcttaa aatcataaac actggggcag aatcttataa agttcattgc atattgtgag
     2881 aacagaatga ggaatgtgat atttggatag ggatttcagc tgcagaccac agcctcttgt
     2941 gagatgatct ctttattctt gaataatgga agatcaaagt ttttgtgctg gcatcagtga
     3001 ggtgtgttgg aggatacagt gtgcaattag accaagatct tatcaggagt attattgagg
     3061 ttttattttc tgtctgcctg ataagccaaa cagtgatagg ctctgttaca ggttgaagca
     3121 aatatatttg taatctactg aaaagtagat tacttctgta attttctccc ttcccagtta
     3181 acaagcccta atctacattt ttaccatcac taatatttgg aactttttca tttctaagaa
     3241 agcttagtac agcgagaaaa tcactgtttc tcatccaaag tagtattgtg tctatccgaa
     3301 tgaatacaag tgataatttc agctatagtg gcgtcatgtc tttgtagctt taggttggat
     3361 tggtgttttc ttaagcagag ttgttagtca tgaacccatc catgatttat cttaaagaga
     3421 taatatacac acagagaaac cataacagta ctcagcaggg ctagctatta agatttcttg
     3481 cacaagtatt tagctttttg taaggtcaac atgtaaattt taaaaacaaa tatagagaga
     3541 cttatgtgtt tgaaatataa atgatatata tggattcgca tgtacctgta tattattaaa
     3601 catgcagtga attgactgat aagtgattgt ctaattgtat ggctagcaat gtaatttatt
     3661 cagactgtat ttttgtacag agcagcacac actaacctat gcctctgtgt cctccttaat
     3721 gcctaaaact gtgcctagaa atttcatctg tcttaaagaa aataaaatat actccatgct
     3781 gttttatgat tttagtttct ctcctgctat tctgtattta ttattttaaa atatctgaca
     3841 tgtttactac ttaaatatga gtttgttgta tcctggttcc ttttttccct cttagcagtc
     3901 atctggggaa acctgtgtgt cactccagtg atgcttgagt gtgcagtccc atgatctgtt
     3961 cttcatttca tgatttttgt agttaaccta aagttatcta tgtggaaaaa aaataaaaaa
     4021 ataaaagtgg tttcactgat aatgctctca ttttgtgtct tttttgtgta agctgattag
     4081 agcaattttc taaattgcat aacatcagtt cattttctat tttaaaatct
//
