LOCUS       NM_001033067            3457 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus transmembrane protein 45b (Tmem45b), mRNA.
ACCESSION   NM_001033067 XM_236010
VERSION     NM_001033067.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3457)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 3457)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001033067.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC100635.1, SRR26360186.891472.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-213               JAXUCZ010000008.1  38168387-38168599   c
            214-413             JAXUCZ010000008.1  38130086-38130285   c
            414-623             JAXUCZ010000008.1  38128224-38128433   c
            624-808             JAXUCZ010000008.1  38127499-38127683   c
            809-954             JAXUCZ010000008.1  38126891-38127036   c
            955-3457            JAXUCZ010000008.1  38123423-38125925   c
FEATURES             Location/Qualifiers
     source          1..3457
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..3457
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /note="transmembrane protein 45b"
                     /db_xref="GeneID:315524"
                     /db_xref="RGD:1305586"
     exon            1..213
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
     exon            214..413
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..1066
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /codon_start=1
                     /product="transmembrane protein 45B"
                     /protein_id="NP_001028239.1"
                     /db_xref="GeneID:315524"
                     /db_xref="RGD:1305586"
                     /translation="MANFKGHALPGSFFLIFGLWWSVKYPLKYFHQKGLKKNRLSLQQ
                     QRIEIIEGAVKALFAVIGILAEQFVPDGPHLHLYHENQWTKLMNWQHSTMYLFFGVSG
                     IIDMLTYLYFNIVPLGLDRVVLAMAVFVEGFLFYFHVHGRPPLDQHIHSLLLFSLFGA
                     TISICLEVILRDNIVLELFRTTLLILQGTWFWQIGFVLFPPFGTPEWDQKDMDNVMFI
                     TMCFCWHYLVALCITAINYSLVYCFLTRVRRRAEGEIIGIQKLKSDHTYQSTLLSGSD
                     EE"
     exon            414..623
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
     exon            624..808
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
     exon            809..954
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
     exon            955..3457
                     /gene="Tmem45b"
                     /gene_synonym="RGD1305586"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctgaagca gggaaaaggt gcttagaaga aacgtgcagt gttgagccac ctgatgtcgt
       61 gctagcgacc gggttagggc catctggggg ttgccagctc ctgcagcggg cggggccggg
      121 cggaacgggg tgcggacgct tgcacctcct gggcacccgc ggtcacacgt gtgaccgaag
      181 ctggcaagtg gacacctctg aggctcggaa aagatattct ggatcactga tggcaaactt
      241 caagggccat gctctccccg ggagcttctt tctaatattt gggctgtggt ggtcagtgaa
      301 gtacccactg aagtactttc accaaaaggg cctaaagaag aacagactga gccttcagca
      361 acagcgcatc gagatcattg aaggtgcagt gaaggctttg tttgcagtca tcgggattct
      421 ggcagagcag tttgttccag acggacctca tctgcacctc taccatgaga atcagtggac
      481 caagctaatg aactggcagc acagcaccat gtacctcttc tttggtgtct cgggaatcat
      541 cgacatgctc acctaccttt acttcaacat tgtgcccctg ggcctagaca gagtggtttt
      601 ggctatggct gtattcgttg aaggctttct cttctatttc cacgttcacg gccgacctcc
      661 actggaccag cacatccact cactcctgct gttcagtctg tttggagcga ccatcagtat
      721 ctgtctggag gtcatcctcc gagataacat tgtgctggag cttttccgaa ccactctcct
      781 tatcctgcag ggaacctggt tctggcagat tggatttgtc ctgttcccgc cgtttggaac
      841 cccggagtgg gaccagaagg acatggacaa cgtcatgttc atcaccatgt gcttctgctg
      901 gcattatttg gtagctctct gcatcacagc catcaactac tcccttgttt actgctttct
      961 gactcgagtg aggagacgcg cagaaggaga gatcatcggg atccagaagc tgaagtctga
     1021 ccacacttac cagtcaaccc ttttgagcgg ctcggatgag gagtgacctc aggcttggag
     1081 ctgtggagac ctcacatcct cttaaacaat agctggaaag gatgcagctt gtcccttgtc
     1141 ctctaaggct tgccttatat aagtgctcct gtccccgtcc tctaaggctt gccttatgac
     1201 cttctagggc tccatatgct gcatccctca tctaatacaa agccatagac tcaaatacag
     1261 gaaattagac ctcaagtgtt ttttatgcac catatacttg gaatatttaa gaatacttta
     1321 acttaaaatc tgtattacat taataccatc catacaggaa aatcatacag tagcaggcct
     1381 gtcctttaga ctttaagact ctgaacacct acactaggaa gtgactatgt ggatgaagca
     1441 agccagttat cactgctgct tctgataact tgcccctcct ctctcaatca agcaggtact
     1501 tccttctcag aaatgttcct tccggaagtt aatgacagct cagtgtcttc aattcagagc
     1561 caagggtcta acagatttaa aaaaaaaaaa aaagcaactc acgagctttg gtattttcag
     1621 cattatcttt ttaaatgttc tctaatacat cgtaccaaag tactgcattt tagccttggt
     1681 cagagataaa gatagatgaa aggtaatttc cttaaaccca gtagctagtt catagctcca
     1741 ctgagaactg aaatcctgct gagtcctcga cgtcacgcta ctgaggagca ttatatagca
     1801 agcctgtgcc tcctagatgc aggggaaaat caggtgatga aaagcttcca attttaaaac
     1861 agctaaaaac caatgtaatg gttttgaatg cttaacacag gcttgatgct ctactgttgg
     1921 tcctggacag gctttgtttc aggaggtttg ttttttagtt tttataactt tcctcaacat
     1981 gtatttatta aatatccact ttgccctagc actgaaatgt ctcaagaatg agtgagatgt
     2041 tcatcacgac actgacagta tactgtaaaa gaactcctga ggttatcaga ggcagtgtgg
     2101 tgggtgggca cctggtaaaa acagtgcagg gggcaagtca ggtttggtgg cccacagctt
     2161 gaatcccagc acctgggaag cagaggcaac tgatttctga gttcgagtcc agtgtgatct
     2221 acaagttaac cagcagaaca gccacagttt tttaaaaccc tgtcccacaa aacaataaaa
     2281 agcaaacaaa atgcaggagc tggagagacg ccgaggctga taagcgcacc tactgctttt
     2341 ccagaggatc caggactgat tccaagcttg gcggctcagt gctgcctcca actgcagttc
     2401 ctgggtatgc tatttgtttc tgatctccac agggagcagg tgcaaacatg atgcacatac
     2461 atgcaggcaa aacccacaca tgcataaaat taaaacaaat ctaaaagaga gagaaaaaaa
     2521 aggaatacac acaccacaga ggaacagggg agaaatggca agttggccct ttagagaagg
     2581 tatccccaga cttagtagta catacaaagc cacacgagta gaacacatgt gattacacac
     2641 acattagttc caatgagaag aggcttctgt gctgactgaa actggagaat cttcaagacc
     2701 aagtaacacc tttcacttgt acaacctgct gtgatgctgg gacacagtct ctcagtgaac
     2761 tctcaccatc ccttgtaatt taagcatgtc ctctgaggct ggtcagcata agatctaaca
     2821 gctacaaagt agaaaaacca acccccactg tgacttggaa gcctggtctt tctcataatc
     2881 cacatcctgt tccttcacca acacccacaa acacaaagtc cttcagattc tctggaagaa
     2941 aggctagcta gctggccttg cgggaagtca catacaggga ttaagcctga aattttctgc
     3001 actccttttc aaggggccct ttggtttgcc agctgagcag gaactcaaac tcattttaca
     3061 aatactgaag agccgttcac cagcaacaac acaaaatgtg ctctctcctt aggtccaagc
     3121 tggaaaagga gcttacttct tacttccggt cttattttca tagaaaaaga tgttaaaatg
     3181 cacttgagac tttttatatt ggcagaacaa agaaacagta ttgggactaa caattattaa
     3241 atataaaata ttaaaattta ttttcgtggg gctggagaga tggctcatca gttaacacta
     3301 ctggctgctc ttccagaggt cctgagttca atttccagca accatgtggt ggctcacaac
     3361 catctgtaat ggagtccgat gccctccttt ggtgtgtcta aaaatagcta ctgtgtactt
     3421 gtatacataa agtaaaaaaa tatttttgta tcactaa
//
