LOCUS       NM_001007745            2886 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus transmembrane protein 43 (Tmem43), mRNA.
ACCESSION   NM_001007745 XM_342724
VERSION     NM_001007745.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2886)
  AUTHORS   Bengtsson,L. and Otto,H.
  TITLE     LUMA interacts with emerin and influences its distribution at the
            inner nuclear membrane
  JOURNAL   J Cell Sci 121 (Pt 4), 536-548 (2008)
   PUBMED   18230648
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083626.1.
            
            On Nov 29, 2004 this sequence version replaced XM_342724.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083626.1, SRR8487230.157757.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..2886
                     /gene="Tmem43"
                     /note="transmembrane protein 43"
                     /db_xref="GeneID:362401"
                     /db_xref="RGD:1549711"
     exon            1..97
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     CDS             86..1288
                     /gene="Tmem43"
                     /EC_number="2.7.1.21"
                     /codon_start=1
                     /product="transmembrane protein 43"
                     /protein_id="NP_001007746.1"
                     /db_xref="GeneID:362401"
                     /db_xref="RGD:1549711"
                     /translation="MAANYSSTGSRKEHVKVTSDPQPGFLERLSETSGGMFVGLVTFL
                     LSFYLIFTNEGRALKTANLLAEGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLS
                     DPNYGVHLPAVKLRRHVEMYQWVETEESNEYTEDGQVKKETKYSYNTEWRSEIVSSKN
                     FDREIGHKNPSAMAVESFTATAPFVQIGRFFLSAGLIDKIDNFKPLSLAKLEDPHVDI
                     IRRGDFFYHSENPKYPEVGDVRVSFSYAGLSSDDPDLGPAHVVTVIARQRGDQLIPYS
                     TKSGDTLLLLHHGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLV
                     DWFPVFRDLVNIGLKAFAFCVATSLTLLTVAAGWLFYRPLWAALLGCLALVPIIIART
                     RVPTKKLE"
     exon            98..247
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            248..382
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            383..477
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            478..527
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            528..597
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            598..668
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            669..790
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            791..865
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            866..967
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            968..1085
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..2858
                     /gene="Tmem43"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaaggacac cgtattctgc gttccggtcg tcatcccaat tcctagagga acaaagcaag
       61 acggcggcag cgaaccaggc ccaccatggc agcgaactat tccagtaccg gcagcaggaa
      121 agaacacgtc aaagtgacat ctgaccccca gccaggcttc ttggagcggc tgagtgagac
      181 ttccggtggg atgttcgtgg ggctcgtgac cttcttgctc tccttctact taatttttac
      241 caatgagggc cgagcactga agactgccaa cttgcttgca gaggggctgt ctctggtggt
      301 gtcccctgac agcatccaca gtgtagctcc agagaatgaa gggagactgg tacacataat
      361 tggggccctg cggacttcca agctcttgtc tgacccaaat tatggcgtcc atctaccagc
      421 tgtgaagctt cgacggcatg tggagatgta ccagtgggtg gagacagaag agtccaatga
      481 gtacacggaa gatggacagg tgaagaagga gacaaagtat tcctacaaca cagagtggag
      541 gtcagaaatt gtcagtagca aaaattttga ccgagagatt ggccacaaaa accccagtgc
      601 catggccgtg gagtctttca cagcaactgc cccctttgtc cagattggca ggtttttcct
      661 gtcagcaggc ctcattgaca agattgacaa cttcaagccc ctgagcctgg ccaagctgga
      721 ggacccccat gtggacatca ttcgccgagg agactttttc taccacagtg aaaaccctaa
      781 gtacccggag gttggtgatg ttcgagtctc cttttcttat gcgggactga gcagtgatga
      841 ccctgacctg ggcccggctc acgtggttac tgtgattgcc cggcagcgag gtgaccagtt
      901 aatcccatat tccaccaagt ccggggacac cttgctgctc ctgcaccatg gagacttctc
      961 agctgaggag gtgttccgta gagaacagaa gagcaattcc atgaagacgt ggggcctgcg
     1021 ggcagctgga tggatggcca tgtttatggg cctcaacctc atgacacgga tcctctacac
     1081 cctagtggat tggtttcctg tcttccgaga tctagtcaac attggcttga aagcctttgc
     1141 cttctgtgtg gccacctcac tgacactgtt gactgtggct gctggctggc tcttctaccg
     1201 accgctgtgg gctgctctac tcggctgcct ggctctggtg cccattatca ttgcacggac
     1261 ccgggtgcca accaaaaagc tggagtgaag cctcagaggc taggctccct gtcacctctg
     1321 cccagctcta gctggggcag gcatctacac accccactct ttgagaggcc agtgtccaca
     1381 tctgcatgta gggtttgctc ttcaccagct catgtcttct ccactccact tcttgccaaa
     1441 atgcagcttt ggtgggcaga agcagcgtga ggtggcaacc cagcaagtac tgttctgctt
     1501 aatgccttcc cttctcgagc tgtcagctga cctgctggtg aagggctcag cctccctgcc
     1561 catccctcct tgctggaacc aagtgccagg actgccacaa ccgccagcta caaccgcaac
     1621 cccagaaaac agccatcact ctccactgct ggcgacacct catcagtagg acacccaggc
     1681 ttggaggagt gcaccccaca tcaggtctct gggtagaacc tgatgtggcc taaagttaac
     1741 actgaagatc ttgtcccgaa ggtctctgtc actgtggcag gacagagtgc ttctatataa
     1801 gccctcaggc ctctggttct aggttctatt gcttcacttc tcgtgttttc cttcccaaaa
     1861 aggatcgtgt gaacggttca cacttgacag ttgctgttac tgaaattaac tcagcaggaa
     1921 tggtgtttca gcgggcgtgg cttgcctggt tttagctcct gaggcatggg gaagcttcac
     1981 ttttgctatg cttttgaacc agtgttaggg gatgcaccgt catgctgggt tgggactgtg
     2041 gaggaacaca tcccttttgt cctctgctat cagaccatct gttcacttgg aggtcatttt
     2101 tatgttgtag tcagtattct aagaaaaggc tggaagcttt tctaagtgac ctccagtcaa
     2161 ctgaagccaa gaatcaggac tcaggcttcc tacaggaggc cacgtctggc ccttttctgt
     2221 gggaccgctt ttgaccttga cactccagcc ccaagtagtt gctgcagggc ggttcttttt
     2281 gcatttaatg tccatcactg tcctcatccc aggtaaaatt catccatacc aatggataga
     2341 atttctaagt taccttgcta ctattacacc ctttgaaagg gatacttagc cctgatgtta
     2401 tcacagagcc ttggtttatc ctgtatcgtt tctgtttgca aactggttgc tgtagcaaca
     2461 agagtgtttg gtggctgacc aaggtatcag gccctctggc cctagtgaca gttcctttca
     2521 tgtcctatgg cttctgtgct ttcagctggg tgaaatacag ccggagacgg cttactgggt
     2581 ttaggatgga aatgataatt cactactgtt cagtgcacgc tggaacaatc ccatcgaaac
     2641 tccccagatg gtttgggaaa atacagtaca gttagtgatg cttaaatacg caacgcttgg
     2701 gattcggtct gtgtaacatt ttcttctatg gtctctacct gccagctcaa aagttaggag
     2761 aaaattatag aagagtaatt tgatgtcttt gaggaaccat gaggtttgta ttctttgtat
     2821 taaattttga aataaatttc tacttatctt ttggtataaa aaaaaaaaaa aaaaaaaaaa
     2881 aaaaaa
//
