LOCUS       NM_001014191            2708 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus transmembrane protein 38B (Tmem38b), mRNA.
ACCESSION   NM_001014191 XM_342839
VERSION     NM_001014191.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2708)
  AUTHORS   Zhao,C., Ichimura,A., Qian,N., Iida,T., Yamazaki,D., Noma,N.,
            Asagiri,M., Yamamoto,K., Komazaki,S., Sato,C., Aoyama,F.,
            Sawaguchi,A., Kakizawa,S., Nishi,M. and Takeshima,H.
  TITLE     Mice lacking the intracellular cation channel TRIC-B have
            compromised collagen production and impaired bone mineralization
  JOURNAL   Sci Signal 9 (428), ra49 (2016)
   PUBMED   27188440
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2708)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 2708)
  AUTHORS   Yamazaki,D., Komazaki,S., Nakanishi,H., Mishima,A., Nishi,M.,
            Yazawa,M., Yamazaki,T., Taguchi,R. and Takeshima,H.
  TITLE     Essential role of the TRIC-B channel in Ca2+ handling of alveolar
            epithelial cells and in perinatal lung maturation
  JOURNAL   Development 136 (14), 2355-2361 (2009)
   PUBMED   19515693
REFERENCE   4  (bases 1 to 2708)
  AUTHORS   Yazawa,M., Ferrante,C., Feng,J., Mio,K., Ogura,T., Zhang,M.,
            Lin,P.H., Pan,Z., Komazaki,S., Kato,K., Nishi,M., Zhao,X.,
            Weisleder,N., Sato,C., Ma,J. and Takeshima,H.
  TITLE     TRIC channels are essential for Ca2+ handling in intracellular
            stores
  JOURNAL   Nature 448 (7149), 78-82 (2007)
   PUBMED   17611541
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079336.1.
            
            On Apr 1, 2005 this sequence version replaced XM_342839.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079336.1, FQ229075.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2708
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q24"
     gene            1..2708
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /note="transmembrane protein 38B"
                     /db_xref="GeneID:362521"
                     /db_xref="RGD:1305703"
     exon            1..140
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..904
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /note="TRICB; TRIC-B"
                     /codon_start=1
                     /product="trimeric intracellular cation channel type B"
                     /protein_id="NP_001014213.1"
                     /db_xref="GeneID:362521"
                     /db_xref="RGD:1305703"
                     /translation="MEYPWDDLTLAFSRTSMFPFFDIAHYLVSVMALKQRPGAVAAAW
                     SNPLSSWLSAMLHCFGGGILSCILLAEPPLKFLTNHTNILLASSIWYIVFFCPRDLVS
                     QGYSYQPIQLLAAGMKEVTRTWKIVGGVAHANGYYRNGWIVMIAVGWARGAGGAIITA
                     CEQLLKGDWKPEGDEWLKMSFPCKVTLLGSIMFTFQHTRHLAISKHDLMFLYTIFLVT
                     IKVTMMMTKDAAVTLTPFEDTLTRMLFGRQQQQFSLSEKKAEVKPSSNGSASSASKRG
                     TEPPSSAKRHAKKED"
     exon            141..297
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
     exon            298..482
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
     exon            483..570
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
     exon            571..688
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
     exon            689..2681
                     /gene="Tmem38b"
                     /gene_synonym="RGD1305703"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctggggccg gcggggtcgg tagtcgtcat ggagtacccg tgggatgatc tgactctggc
       61 cttctcccgc acgtccatgt ttcccttttt tgacatcgcc cactacctgg tgtcggtgat
      121 ggcgctgaag cagcggccag gagcggtggc cgcggcctgg agcaaccccc tgtccagctg
      181 gttgagtgct atgctgcatt gctttggggg aggaattttg tcgtgtatac tgcttgcaga
      241 gcctccactg aagttcctta caaaccacac taatatttta ctggcatctt caatctggta
      301 tattgtattc ttttgcccac gtgacctagt ttcccagggc tactcatatc aacctattca
      361 gctcctggct gcgggaatga aggaagtgac cagaacttgg aaaatagtag gtggagtcgc
      421 gcatgctaat ggctattaca ggaatggctg gatagtcatg atagctgttg gatgggcccg
      481 aggtgcaggt ggtgctatca tcacagcttg tgagcagttg ttaaaaggag actggaaacc
      541 agaaggtgat gaatggctga agatgtcctt cccttgcaag gtaaccctgc tggggtcaat
      601 tatgttcact ttccagcaca ccaggcatct ggcaatatca aagcatgatc tcatgttcct
      661 ttacaccatc ttcctcgtga ccataaaggt gaccatgatg atgacgaagg atgctgctgt
      721 gactctcacg cccttcgagg acaccttgac tcggatgctg tttggccggc agcagcagca
      781 gttttcgttg agtgaaaaga aagctgaagt caaaccgtct tccaatggtt ctgcctcctc
      841 agcgtccaag cggggcacag agcctccaag tagtgctaag agacacgcca agaaagaaga
      901 ctgaggattg tccctgagct ccagaggcaa aaagaaagag ttacttatct ctcagagtgt
      961 ggtctagttc tatgtaaatg atgtgaaata aggcttatct gtagggatgg aggagacaaa
     1021 aggagaagcg ctttgtttca gggacaccgc tcgctctgct gatctaactc ttggggtcac
     1081 gagtgtatca tgtgaatttt tctggtgtaa gagattctca taattatttg aatagtttta
     1141 tattgataaa agaatacttt tttaaatgtt agaaaagttc acttgttact aaaaaattat
     1201 aagaatttaa cacaaaaaat tcagtatttt tttttacttt ttgaatgact ataattgtgt
     1261 tttaattctg cagaattaaa cttttacttc atatttccaa tataattcct gtatatagaa
     1321 gacaattcct atttaatttt gaacatggag aacttttcct aaatactttt tgacctaaaa
     1381 taaacaaata gtgtatattt ggtgtataca tttgttttat atatcttaca cacattaaaa
     1441 atacccaaaa tataatttat tttattttca agtattattt ttcattgagg ttgcaatgtt
     1501 aatatgagtc tcagtttgaa gttcgtttca tgcccttgtt ttaaaaacta ctttttcctc
     1561 agaaaactag ggttacaatt tgtgagtatc tttttctttt tgcaacagca atctcactct
     1621 gtagcccagg ctggcctcag acctcctacc tcggcttccc aagtgctggg ccaccatgcc
     1681 aggttgggac gcagtttcta ttgttaataa tcctgtgttt ggagcctggg tggttttgtg
     1741 tctgtcctta ccccgtttca acagctggag agattcttca cacgttgaat gttccccctg
     1801 actcggtctg tctgaatatg ctggtggcat gtgtctgcga ctcaagaaga agccccgtcg
     1861 tggctgaaag tgtgtcccgt acctctgttc cggtgatcac tgcttcacga gtttatttga
     1921 ctgtctcttg tgagtttgca gtttggtatc tctacttaat agacgtgtgt atatttctag
     1981 ttgtattgga aatgaaagct gttttcctgc aaaaacgctc agctctcatg aggactgtcg
     2041 tcccacaatt gacgtgaacc acagaaccta acatcacgag gtagactact ggagtgaagc
     2101 agtacaacgt taagtctgcc gactagttga ccaaaagcaa acaagcagac atactaaatg
     2161 ataggtttta tttgctttat ttggtacata caagtcgtgt tataacattc atattctgtg
     2221 gtgtgacttt cataccaaga atgtgagctg tctgtgttag gcatgtttgc ttggttaagc
     2281 acttaaatga catccaatat ataaagtttt ccttttttcc cctttttcct tttttttttg
     2341 ttttgttttg ttttgttttt caagacaggg tttctctgtg taatagcact gatggtttcc
     2401 gttttaattt ttaacacaca tgcacaatag caggtagttt tacttgatta agaaaaagat
     2461 tttgagtggg gcacttttga taactttgag aaaattgctt atttttgata ttgtgacaaa
     2521 aagcactaaa ttgcattctc tattatattt gataatctgt agttaaaaac tttgcaaaat
     2581 tcgtatgtta ttggtctgaa gttgtagttg tcgttaaaat ggtaagaatc ttgtttttca
     2641 tttgtgttaa aaacaaattc attaaactaa gtactttagt aaaaaaaaaa aaaaaaaaaa
     2701 aaaaaaaa
//
