LOCUS       XM_017595366            1592 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus transmembrane protein 249 (Tmem249),
            mRNA.
ACCESSION   XM_017595366
VERSION     XM_017595366.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1592
                     /gene="Tmem249"
                     /note="transmembrane protein 249; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 4 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100910811"
                     /db_xref="RGD:6496784"
     CDS             1..843
                     /gene="Tmem249"
                     /codon_start=1
                     /product="cation channel sperm-associated auxiliary
                     subunit TMEM249"
                     /protein_id="XP_017450855.1"
                     /db_xref="GeneID:100910811"
                     /db_xref="RGD:6496784"
                     /translation="MTELRVSSSRTQAAQPGFYLLPGPAVVWQLLLLPSAATLELSRV
                     PKEQQASGSPASIFAKCFQLWAVGFFSTERHLANQLKKNSFYPFKQQQPDVFVLEYYL
                     DTLWKGILLFIICLICISCNILKEVDHQKTWCFPVYGMAIGLWLMLSSMPQRRLVLNH
                     TRGMYHFSIQGRTVCQGPMHLVYVRLALSSDAYGGRFYQLVLCGHKLEPLVLVQLSER
                     YEQMEFLGRHIARKLNINYFDYLASSYRHVVRHWPLGATFSPGIVHRKTQVYTKSSVS
                     ELDV"
ORIGIN      
        1 atgacggagc ttagagtaag ctcttctaga acccaggcag cccagcctgg attctacctg
       61 ctccctggcc ctgctgttgt ctggcagctc ttgcttcttc cctcagctgc aaccctggaa
      121 ttgtctcggg tccccaagga gcagcaggcc agtggctccc ctgcatccat ctttgctaag
      181 tgcttccaac tctgggctgt aggattcttc tctactgagc gccacttagc caatcagctc
      241 aagaaaaaca gcttttaccc cttcaagcag cagcagccgg atgtctttgt gctcgagtac
      301 tacttagaca cgctctggaa ggggatactg ctctttatca tctgcctcat ctgcatttcc
      361 tgtaatatcc tgaaggaggt agaccatcag aagacctggt gctttcctgt ctatggcatg
      421 gcgataggcc tgtggctcat gctctcctca atgccccagc gccgcctcgt gctcaaccac
      481 acgcgcggca tgtaccactt ctccatccag ggccgtactg tttgtcaggg gccaatgcat
      541 ctggtctacg tgcgcctggc actcagctct gatgcctatg gaggtcgctt ctaccagctg
      601 gtcctttgtg gccacaagct agagccactt gtgctggtgc agctgtcaga acgctatgag
      661 caaatggaat tcttgggccg gcacattgcc cggaaactca acatcaacta ctttgactac
      721 ctggcttcct cctatcgtca tgtggtccgc cactggccac tgggggccac ctttagccct
      781 ggtattgtgc atcgaaaaac acaagtctac actaagtcaa gtgtcagcga actggatgtg
      841 taacccctgg ggcctgaacc ctggcctcct tttgcatacc ctacctccct tatccccatc
      901 ctggagggac tgacacccag ccccacctac tgcccttcct ctaactaaag ctgctttagc
      961 ctccaaccag caggtttcct gtctgttggt ttgttttcaa aggggcttcc tttcagggtc
     1021 ttcccctaac agaccttcca gggcccgggg aaccgcatct tctccagctg ctggagcaaa
     1081 ccccagagtt tgggttggaa gaagatggga gactatcagg ggagggcccc cgagtgtctg
     1141 aactcatcac cagacccagg actttctgcc cctctaagcc agcaatgttg aactggtgct
     1201 aaccaatcaa ggccaggagt cagactatga ttggtctatc tgacttaggc acctgcccct
     1261 agtccagcca atcatggtat ggagcacagt cagatgatat gccttggacc ttttgttata
     1321 ttcaggacta tgtaccccaa tgttgctttt gaacacttgg cttccagagt cctcagccca
     1381 gggttaccag acccaccaag gcatatgctt tgtatcccca atgaactccc tgtctggcag
     1441 aatactctcg ctcccacact agcacctgag gctgccctgg gaacagagga ccactgtcca
     1501 cctggctctg tggtcaccat gtgtacctgg taccaggact tgcttcataa tttgcagagc
     1561 cacaaaataa aagtgtagag cccttgttaa aa
//
